Gene: AT5G03450

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G03450
  • Transcript Identifier AT5G03450.1
  • Gene Type Coding gene
  • Location Chr5 : 858954-862238 : negative

Gene Family Information

  • ID HOM05D004644
  • #Genes/#Species 157/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G03450.1
  • uniprot Q9LZE2

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03750.1); Has 6680 Blast hits to 3674 proteins in 290 species: Archae - 4; Bacteria - 114; Metazoa - 3367; Fungi - 525; Plants - 736; Viruses - 186; Other Eukaryotes - 1748 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036297
IEA
Gene Ontologyinterstrand cross-link repair
GO:0036297
IEA
InterProinterstrand cross-link repair
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IBA
Gene Ontologyprotein ubiquitination1
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
IEA
Gene Ontologynucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR037381 E3 ubiquitin-protein ligase RFWD3
Mapman id Description
35.1 not assigned.annotated