Gene: AT4G39540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39540
  • Transcript Identifier AT4G39540.3
  • Gene Type Coding gene
  • Location Chr4 : 18378561-18380253 : positive

Gene Family Information

  • ID HOM05D002058
  • #Genes/#Species 323/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39540.3
  • symbol SK2
  • Alias ATSK2
  • uniprot Q8GY88

Descriptions

  • Description shikimate kinase 2
  • Computational description shikimate kinase 2 (SK2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5); Has 7816 Blast hits to 7816 proteins in 2412 species: Archae - 26; Bacteria - 5492; Metazoa - 45; Fungi - 121; Plants - 162; Viruses - 0; Other Eukaryotes - 1970 (source: NCBI BLink).
  • Computational description shikimate kinase 2 (SK2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623); BEST Arabidopsis thaliana protein match is: shikimate kinase 1 (TAIR:AT2G21940.5).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process
GO:0009073
TAS
Gene Ontologyaromatic amino acid family biosynthetic process1
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0009423
IEA
Gene Ontologychorismate biosynthetic process
GO:0019632
IDA
Gene Ontologyshikimate metabolic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016301
IEA
GOA Databasekinase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0004765
IEA
GOA Databaseshikimate kinase activity
GO:0004765
IDA
IBA
Gene Ontologyshikimate kinase activity2 3
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM, IBA
TAS
Gene Ontologychloroplast2 3
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000623 Shikimate kinase/Threonine synthase-like 1
IPR031322 Shikimate kinase/gluconokinase
Mapman id Description
4.1.5.1.4 Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.shikimate kinase