Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G21940 shikimate kinase 1 Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves%2C and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast. shikimate kinase 1 (SK1)%3B FUNCTIONS IN: shikimate kinase activity%2C ATP binding%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Shikimate kinase (InterPro:IPR000623)%3B BEST Arabidopsis thaliana protein match is: shikimate kinase 2 (TAIR:AT4G39540.2)%3B Has 7831 Blast hits to 7831 proteins in 2412 species: Archae - 26%3B Bacteria - 5482%3B Metazoa - 44%3B Fungi - 134%3B Plants - 162%3B Viruses - 0%3B Other Eukaryotes - 1983 (source: NCBI BLink). Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15670 LG-6 - View
Acer truncatum Atru.chr4.367 chr4 - View
Actinidia chinensis Actinidia15623 Lachesis_group28 - View
Arabidopsis lyrata AL4G11260 scaffold_4 + View
Arabidopsis lyrata AL7G11580 scaffold_7 + View
Avicennia marina MSTRG.2530 ScioBoG_102835_HRSCAF_103059 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JNA5NA 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A4G237 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.91QE12 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WB0Z4U 2.7.1.71 - Shikimate kinase arahy.Tifrunner.gnm1.Arahy.03 + View
Brassica carinata BcaNung00872 Contig372 + View
Brassica carinata BcaC02g08751 ChrC02 - View
Brassica carinata BcaB06g27797 ChrB06 + View
Brassica napus A04p16530 A04 + View
Brassica napus C01p00580 C01 + View
Brassica napus A01p00410 A01 + View
Brassica napus C04p51060 C04 + View
Brassica oleracea BolC1t00059H C1 + View
Brassica oleracea BolC4t26699H C4 + View
Brassica rapa BraA04t17289Z A04 + View
Brassica rapa BraA01t00050Z A01 + View
Camellia sinensis var. sinensis CSS0046386 putative shikimate kinase [Fagus sylvatica] Chr2 - View
Camellia sinensis var. sinensis CSS0024356 hypothetical protein CICLE_v10026159mg [Citrus clementina] Chr1 + View
Cannabis sativa CANSAT01G1563 NC_044373.1 + View
Cicer arietinum L. Ca_17695_v3 Ca_LG6_v3 + View
Corylus avellana Haze_25044 Similar to SK: Shikimate kinase, chloroplastic (Solanum lycopersicum OX%3D4081) 8 - View
Coffea canephora Cc07_g16270 Shikimate kinase, chloroplastic chr7 - View
Carpinus fangiana Cfa002756 Cfa01 - View
Cardamine hirsuta CARHR113020 Shikimate kinase Chr4 + View
Cardamine hirsuta CARHR247190 Shikimate kinase family protein Chr7 - View
Carya illinoinensis CiPaw.03G134200 PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Chr03 + View
Citrullus lanatus ClCG02G001040 Shikimate kinase CG_Chr02 + View
Cucumis melo MELO3C020958.2 Shikimate kinase chr11 + View
Capsella rubella Carub.0007s0141 2.7.1.71 - Shikimate kinase scaffold_7 + View
Capsella rubella Carub.0004s0108 2.7.1.71 - Shikimate kinase scaffold_4 + View
Daucus carota DCAR_001370 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv42694 GWHABJS00000021 - View
Davidia involucrata Dinv19485 GWHABJS00000014 - View
Durio zibethinus Duzib147G0681 NW_019168470.1 + View
Eucalyptus grandis Eucgr.I00321 Chr09 + View
Erythranthe guttata Migut.H02438 scaffold_8 - View
Eutrema salsugineum Thhalv10000262m.g K00891 - shikimate kinase (E2.7.1.71, aroK, aroL) scaffold_15 + View
Gossypium hirsutum Gohir.A11G198100 2.7.1.71 - Shikimate kinase A11 - View
Glycine max Glyma.05G183700 2.7.1.71 - Shikimate kinase Gm05 - View
Glycine max Glyma.06G146566 2.7.1.71 - Shikimate kinase Gm06 - View
Glycine max Glyma.04G219200 2.7.1.71 - Shikimate kinase Gm04 + View
Glycine max Glyma.08G141500 2.7.1.71 - Shikimate kinase Gm08 - View
Gossypium raimondii Gorai.007G244500 Chr07 - View
Lupinus albus Lalb_Chr12g0203521 2.7.1.71 - Shikimate kinase Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0296211 2.7.1.71 - Shikimate kinase Lalb_Chr13 - View
Lotus japonicus Lj1g0011600 2.7.1.71 - Shikimate kinase chr1 + View
Lotus japonicus Lj4g0006731 2.7.1.71 - Shikimate kinase chr4 + View
Lonicera japonica Lj4C866G0 GWHAAZE00000004 + View
Malus domestica MD15G1332900 shikimate kinase 1 Chr15 + View
Malus domestica MD01G1019500 shikimate kinase 1 Chr01 - View
Manihot esculenta Manes.12G142800 Chromosome12 - View
Oryza sativa ssp. japonica Os02g0749300 Similar to Shikimate kinase, chloroplast precursor (EC 2.7.1.71). chr02 + View
Punica granatum PGR004G2752 NC_045131.1 - View
Populus trichocarpa Potri.005G084600 2.7.1.71 - Shikimate kinase Chr05 - View
Phaseolus vulgaris Phvul.002G264800 PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Chr02 - View
Quercus lobata QL06p032113 6 + View
Rhododendron simsii Rhsim10G0150100 chr10 + View
Striga asiatica SGA_v2.0_scaffold51G18754 scaffold51 - View
Striga asiatica SGA_v2.0_scaffold2G01295 scaffold2 + View
Salvia bowleyana SalBow6G0726 GWHASIU00000002 - View
Salix brachista Sabra05G0069700 GWHAAZH00000005 - View
Solanum lycopersicum Solyc04g051860.3 shikimate kinase precursor SL4.0ch04 + View
Schrenkiella parvula Sp4g01020 2.7.1.71 - Shikimate kinase ch4-1 + View
Schrenkiella parvula Sp7g36340 2.7.1.71 - Shikimate kinase ch7-6 - View
Solanum pennellii Sopen04g023190 shikimate kinase 1 (SK1) | FUNCTIONS IN: shikimate kinase activity, ATP binding | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Shikimate kinase | BEST Arabidopsis thaliana protein match is: shikimate kinase 2 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400016553 Shikimate kinase, chloroplastic ST4.03ch04 - View
Trochodendron aralioides TAR381G1363 group11 - View
Theobroma cacao Thecc.01G113000 Shikimate kinase Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807723 shikimate kinase 1%2C chloroplastic-like NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104824858 shikimate kinase 1%2C chloroplastic-like NW_010966933.1 + View
Trifolium pratense TPR.G2181 Tp57577_TGAC_v2_LG3 + View
Vigna mungo VMungo0251G3029 CM024069.1 - View
Vitis vinifera GSVIVG01022229001 chr7 - View
Zea mays Zm00001eb194410 Zm00001e023892 Shikimate kinase Shikimate kinase 1 chloroplastic 4 - View