Gene: AT4G37940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G37940
  • Transcript Identifier AT4G37940.1
  • Gene Type Coding gene
  • Location Chr4 : 17835695-17838621 : negative

Gene Family Information

  • ID HOM05D000042
  • #Genes/#Species 4894/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G37940.1
  • symbol AGL21
  • uniprot Q9SZJ6

Descriptions

  • Description AGAMOUS-like 21
  • Computational description AGAMOUS-like 21 (AGL21); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, C globular stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 17 (TAIR:AT2G22630.1); Has 7243 Blast hits to 7239 proteins in 914 species: Archae - 0; Bacteria - 6; Metazoa - 648; Fungi - 305; Plants - 6180; Viruses - 2; Other Eukaryotes - 102 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045944
IEA
Gene Ontologypositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity2
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000977
IEA
Gene OntologyRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus4
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
IPR002487 Transcription factor, K-box
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)