Gene: AT4G26750

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G26750
  • Transcript Identifier AT4G26750.1
  • Gene Type Coding gene
  • Location Chr4 : 13475848-13478382 : negative

Gene Family Information

  • ID HOM05D005375
  • #Genes/#Species 141/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G26750.1
  • symbol EXT-like
  • Alias LIP5,homolog of mammalian LYST-INTERACTING PROTEIN5
  • full_name extensin-like
  • uniprot Q9SZ15

Descriptions

  • Description hydroxyproline-rich glycoprotein family protein
  • Computational description hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 11 (TAIR:AT3G59100.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032511
IEA
GOA Databaselate endosome to vacuole transport via multivesicular body sorting pathway
GO:0032511
IBA
Gene Ontologylate endosome to vacuole transport via multivesicular body sorting pathway1
GO:0032511
IEA
InterProlate endosome to vacuole transport via multivesicular body sorting pathway
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006952
IEA
GOA Databasedefense response
GO:1903335
IGI
Gene Ontologyregulation of vacuolar transport2
GO:0080001
IMP
Gene Ontologymucilage extrusion from seed coat3
GO:1900426
IMP
Gene Ontologypositive regulation of defense response to bacterium4
GO:0098542
IMP
Gene Ontologydefense response to other organism4
GO:0016192
IPI
Gene Ontologyvesicle-mediated transport5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
IDA
Gene Ontologyprotein homodimerization activity6
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005771
IEA
GOA Databasemultivesicular body
GO:0005771
IDA
IBA
Gene Ontologymultivesicular body1 4
GO:0016020
IEA
GOA Databasemembrane
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IPI
Gene Ontologyendosome2
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus4
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm4
GO:0010008
IEA
GOA Databaseendosome membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039431 Vta1/callose synthase, N-terminal
IPR023175 Vta1/Callose synthase, N-terminal domain superfamily
IPR041212 Vta1, C-terminal
IPR044538 Vacuolar protein sorting-associated protein Vta1-like
Mapman id Description
22.4.1.4.2 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.regulatory component VTA1