Gene: AT4G20800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G20800
  • Transcript Identifier AT4G20800.1
  • Gene Type Coding gene
  • Location Chr4 : 11139656-11141242 : positive

Gene Family Information

  • ID HOM05D000128
  • #Genes/#Species 2706/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G20800.1
  • uniprot Q9SVG7

Descriptions

  • Description FAD-binding Berberine family protein
  • Computational description FAD-binding Berberine family protein; FUNCTIONS IN: oxidoreductase activity, FAD binding, catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, synergid; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G26420.1); Has 4385 Blast hits to 4167 proteins in 621 species: Archae - 36; Bacteria - 1918; Metazoa - 13; Fungi - 1639; Plants - 666; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071949
IEA
Gene OntologyFAD binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0050660
IEA
GOA Databaseflavin adenine dinucleotide binding
GO:0050660
IEA
InterProflavin adenine dinucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
ISS
Gene Ontologycell wall
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005576
IEA
GOA Databaseextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012951 Berberine/berberine-like
IPR036318 FAD-binding, type PCMH-like superfamily
IPR006094 FAD linked oxidase, N-terminal
IPR016167 FAD-binding, type PCMH, subdomain 1
IPR016169 FAD-binding, type PCMH, subdomain 2
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor