Gene: AT4G20810
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G20810
- Transcript Identifier AT4G20810.1
- Gene Type Coding gene
- Location Chr4 : 11141427-11143597 : negative
Gene Family Information
- ID HOM05D003188
- #Genes/#Species 214/98
- Phylogenetic origin
- ID ORTHO05D003602
- #Genes/#Species 213/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G20810.1
- uniprot Q9SVG6
Descriptions
- Description transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein
- Computational description transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIE complex; CONTAINS InterPro DOMAIN/s: Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT4G20340.1); Has 481 Blast hits to 473 proteins in 159 species: Archae - 3; Bacteria - 16; Metazoa - 170; Fungi - 133; Plants - 89; Viruses - 9; Other Eukaryotes - 61 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0001113 | IBA | Gene Ontology | transcription open complex formation at RNA polymerase II promoter | 1 |
GO:0006413 | IEA | GOA Database | translational initiation | |
GO:0006367 | IEA | GOA Database | transcription initiation from RNA polymerase II promoter | |
GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003743 | IEA | GOA Database | translation initiation factor activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISM | Gene Ontology | nucleus | |
GO:0005673 | IBA | Gene Ontology | transcription factor TFIIE complex | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.3.3.3.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit alpha |