Gene: AT4G17390

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17390
  • Transcript Identifier AT4G17390.1
  • Gene Type Coding gene
  • Location Chr4 : 9714407-9715545 : negative

Gene Family Information

  • ID HOM05D002053
  • #Genes/#Species 324/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17390.1
  • uniprot Q8VYF1

Descriptions

  • Description Ribosomal protein L23/L15e family protein
  • Computational description Ribosomal protein L23/L15e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, nucleolus, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L15e (InterPro:IPR000439), Ribosomal protein L23/L15e, core (InterPro:IPR012678), Ribosomal protein L15e, conserved site (InterPro:IPR020925); BEST Arabidopsis thaliana protein match is: Ribosomal protein L23/L15e family protein (TAIR:AT4G16720.1); Has 1380 Blast hits to 1379 proteins in 431 species: Archae - 314; Bacteria - 0; Metazoa - 407; Fungi - 163; Plants - 282; Viruses - 0; Other Eukaryotes - 214 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0002181
IBA
Gene Ontologycytoplasmic translation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IDA, HDA
Gene OntologymRNA binding2 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus4
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 5
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005829
HDA
RCA
Gene Ontologycytosol6 7
GO:0005794
RCA
Gene OntologyGolgi apparatus8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000439 Ribosomal protein L15e
IPR024794 Ribosomal protein L15e core domain superfamily
IPR012678 Ribosomal protein L23/L15e core domain superfamily
Mapman id Description
17.1.2.1.16 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL15