Gene: AT4G15420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G15420
  • Transcript Identifier AT4G15420.2
  • Gene Type Coding gene
  • Location Chr4 : 8823453-8825949 : positive

Gene Family Information

  • ID HOM05D006348
  • #Genes/#Species 125/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G15420.2
  • uniprot Q8W1E7

Descriptions

  • Description Ubiquitin fusion degradation UFD1 family protein
  • Computational description Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: proteolysis, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Peptidase, C-terminal, archaeal/bacterial (InterPro:IPR007280), Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT2G29070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0030433
IBA
Gene Ontologyubiquitin-dependent ERAD pathway1
GO:0071712
IBA
Gene OntologyER-associated misfolded protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031593
IBA
Gene Ontologypolyubiquitin modification-dependent protein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0034098
IBA
Gene OntologyVCP-NPL4-UFD1 AAA ATPase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042299 Ufd1-like, Nn domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR004854 Ubiquitin fusion degradation protein Ufd1-like
Mapman id Description
35.1 not assigned.annotated