Gene: AT4G15236
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G15236
- Transcript Identifier AT4G15236.1
- Gene Type Coding gene
- Location Chr4 : 8696677-8702727 : positive
Gene Family Information
- ID HOM05D000103
- #Genes/#Species 3100/100
- Phylogenetic origin
- ID ORTHO05D000049
- #Genes/#Species 2857/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G15236.1
- symbol ABCG43
- full_name ATP-binding cassette G43
- uniprot Q7PC81
Descriptions
- Description ABC-2 and Plant PDR ABC-type transporter family protein
- Computational description ABC-2 and Plant PDR ABC-type transporter family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 and Plant PDR ABC-type transporter family protein (TAIR:AT4G15233.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0055085 | IEA | GOA Database | transmembrane transport |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0140359 | IEA | Gene Ontology | ABC-type transporter activity | |
GO:0140359 | IEA | InterPro | ABC-type transporter activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISM | Gene Ontology | nucleus | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016020 | IEA | InterPro | membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR043926 | ABC transporter family G domain |
IPR003439 | ABC transporter-like, ATP-binding domain |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR003593 | AAA+ ATPase domain |
IPR013581 | Plant PDR ABC transporter associated |
IPR013525 | ABC-2 type transporter |
IPR034003 | ATP-binding cassette transporter, PDR-like subfamily G, domain 2 |
Mapman id | Description |
---|---|
24.1.3.2.2 | Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter |