Gene: AT4G05400
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G05400
- Transcript Identifier AT4G05400.2
- Gene Type Coding gene
- Location Chr4 : 2741256-2742008 : positive
Gene Family Information
- ID HOM05D005854
- #Genes/#Species 134/92
- Phylogenetic origin
- ID ORTHO05D007175
- #Genes/#Species 133/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G05400.2
- uniprot Q9M0V5
Descriptions
- Description copper ion binding protein
- Computational description copper ion binding; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21140.1); Has 54 Blast hits to 54 proteins in 22 species: Archae - 8; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
- Computational description copper ion binding; FUNCTIONS IN: copper ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IDA | GOA Database | copper ion binding | |
| GO:0005507 | HDA | Gene Ontology | copper ion binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005762 | IEA | Gene Ontology | mitochondrial large ribosomal subunit | |
| GO:0005762 | IEA | InterPro | mitochondrial large ribosomal subunit | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005739 | IDA | GOA Database | mitochondrion | |
| GO:0005739 | HDA | Gene Ontology | mitochondrion | 2 |
| GO:0005829 | HDA | Gene Ontology | cytosol | 3 |
| GO:0005761 | IBA | Gene Ontology | mitochondrial ribosome | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039145 | 39S ribosomal protein L40, mitochondrial |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |