Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.3e-132 476.5 251 100.0
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.6e-122 443.0 251 90.4
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 8.6e-121 437.2 253 92.1
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 3.1e-118 428.7 254 89.4
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 8.9e-118 427.2 254 87.8
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 8.9e-118 427.2 254 89.8
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 8.6e-113 410.6 254 85.8
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 9.5e-112 407.1 254 86.2
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 1.2e-111 406.8 247 84.6
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 3.6e-111 405.2 252 85.7
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 3.6e-111 405.2 252 85.7
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 1.9e-104 382.9 255 82.0
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 1.2e-101 373.6 251 78.5
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.2e-100 369.4 252 77.8
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 6.6e-97 357.8 253 74.3
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 1.0e-89 334.0 252 70.2
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 3.0e-89 332.4 251 68.1
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 1.1e-86 323.9 252 67.5
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 9.0e-86 320.9 251 66.1
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.5e-85 318.5 251 66.9
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.5e-85 318.5 251 66.5
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 9.9e-85 317.4 251 66.5
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.9e-84 315.1 251 65.7
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 4.9e-84 315.1 251 66.1
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 4.2e-83 312.0 251 65.7
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 2.1e-82 309.7 251 65.3
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 2.5e-80 302.8 251 62.5
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 4.3e-80 302.0 252 64.3
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 2.8e-79 299.3 251 62.5
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 1.0e-76 290.8 253 60.5
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 5.5e-75 285.0 254 62.6
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 9.3e-75 284.3 250 60.4
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 2.1e-74 283.1 254 62.2
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 2.1e-74 283.1 254 62.2
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 2.7e-74 282.7 255 62.0
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 3.5e-74 282.3 254 61.8
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 6.0e-74 281.6 257 62.3
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 2.3e-73 279.6 255 60.0
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 2.5e-72 276.2 256 59.0
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 9.6e-72 274.2 255 60.4
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 2.1e-71 273.1 256 59.0
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 3.7e-71 272.3 251 58.2
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 1.1e-70 270.8 254 57.5
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 2.4e-70 269.6 255 58.8
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 4.1e-70 268.9 253 58.9
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 4.1e-70 268.9 254 57.9
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 5.3e-70 268.5 253 58.9
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.2e-69 267.3 244 59.4
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 1.5e-69 266.9 252 57.9
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 2.6e-69 266.2 250 56.4
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 4.5e-69 265.4 253 57.7
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 7.6e-69 264.6 250 56.4
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 7.6e-69 264.6 251 56.2
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 1.3e-68 263.8 251 59.4
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.2e-68 263.1 249 57.8
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.9e-68 262.7 249 58.6
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 3.8e-68 262.3 246 58.9
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 6.5e-68 261.5 258 58.5
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 8.4e-68 261.2 256 56.2
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 8.4e-68 261.2 258 55.4
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 8.4e-68 261.2 248 57.7
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 5.5e-67 258.5 255 54.9
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 5.5e-67 258.5 255 54.5
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 7.2e-67 258.1 256 55.9
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.2e-66 257.3 251 57.8
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 1.6e-66 256.9 259 54.4
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 2.1e-66 256.5 241 59.3
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 3.5e-66 255.8 251 57.8
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 6.1e-66 255.0 250 56.8
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.0e-65 254.2 255 53.7
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.0e-65 254.2 240 57.5
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.0e-65 252.7 252 56.7
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 3.9e-65 252.3 249 57.8
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.9e-65 252.3 252 56.7
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 6.7e-65 251.5 257 54.5
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 1.5e-64 250.4 252 54.4
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 1.5e-64 250.4 252 54.4
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 1.9e-64 250.0 244 58.2
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.9e-64 250.0 243 57.2
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 1.9e-64 250.0 241 59.3
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 2.5e-64 249.6 254 55.1
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.5e-64 249.6 178 70.8
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 5.7e-64 248.4 253 55.3
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 7.4e-64 248.1 252 54.4
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 7.4e-64 248.1 243 57.2
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 9.7e-64 247.7 254 55.5
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 1.3e-63 247.3 251 53.8
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 2.2e-63 246.5 229 58.5
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 8.2e-63 244.6 238 58.8
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 1.4e-62 243.8 241 58.1
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 5.3e-62 241.9 257 52.5
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.2e-61 240.7 249 57.4
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.2e-61 240.7 252 54.4
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.5e-61 240.4 252 54.4
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.5e-61 240.4 237 55.7
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 1.0e-60 237.7 240 56.2
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.3e-60 237.3 249 56.2
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 8.5e-60 234.6 252 52.0
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 8.5e-60 234.6 244 56.1
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 1.6e-58 230.3 245 53.1
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 6.1e-58 228.4 256 53.5
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 6.1e-58 228.4 257 49.8
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 7.9e-58 228.0 240 55.8
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 5.7e-56 221.9 240 53.8
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 1.7e-55 220.3 243 51.0
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 6.3e-55 218.4 237 51.9
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 1.1e-54 217.6 249 51.8
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 1.4e-54 217.2 248 50.0
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 5.3e-54 215.3 252 50.4
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 5.9e-53 211.8 231 51.9
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 3.1e-46 189.5 124 77.4
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.1e-46 189.1 183 56.3
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 1.8e-41 173.7 196 51.5
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 2.0e-40 170.2 131 67.2
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 2.9e-36 156.4 189 47.1
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 1.4e-25 120.9 131 51.9
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 3.0e-25 119.8 231 36.8
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 6.8e-25 118.6 234 38.0
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 1.1e-22 111.3 173 41.6
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 5.4e-22 109.0 142 44.4
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 1.1e-19 101.3 75 70.7
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 1.5e-19 100.9 137 45.3
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.0e-17 94.7 79 68.4
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 2.0e-16 90.5 106 50.0
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 1.3e-15 87.8 152 39.5
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 3.2e-14 83.2 95 49.5
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 2.3e-09 67.0 62 51.6
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 8.9e-09 65.1 117 37.6
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 7.5e-08 62.0 81 43.2
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 2.9e-07 60.1 65 53.8


User provided reference genes

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