Gene: AT4G05220
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G05220
- Transcript Identifier AT4G05220.1
- Gene Type Coding gene
- Location Chr4 : 2685104-2685784 : negative
Gene Family Information
- ID HOM05D004864
- #Genes/#Species 152/82
- Phylogenetic origin
- ID ORTHO05D005393
- #Genes/#Species 158/84
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G05220.1
- uniprot Q9M0X3
Descriptions
- Description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
- Computational description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G61760.1); Has 847 Blast hits to 847 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0098542 | IEA | Gene Ontology | defense response to other organism | |
| GO:0098542 | IEA | InterPro | defense response to other organism |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0009506 | IBA | Gene Ontology | plasmodesma | 1 |
| GO:0046658 | IBA | Gene Ontology | anchored component of plasma membrane | 1 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |