Gene: AT4G05210

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G05210
  • Transcript Identifier AT4G05210.2
  • Gene Type Coding gene
  • Location Chr4 : 2682867-2684867 : positive

Gene Family Information

  • ID HOM05D006314
  • #Genes/#Species 126/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G05210.2
  • symbol LpxD1
  • Alias AtLpxD1
  • full_name lipid X D1
  • uniprot F4JGP6

Descriptions

  • Description Trimeric LpxA-like enzymes superfamily protein
  • Computational description Trimeric LpxA-like enzymes superfamily protein; FUNCTIONS IN: transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Trimeric LpxA-like (InterPro:IPR011004), Bacterial transferase hexapeptide repeat (InterPro:IPR001451); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT4G21220.1); Has 11511 Blast hits to 11440 proteins in 1956 species: Archae - 52; Bacteria - 7646; Metazoa - 8; Fungi - 29; Plants - 63; Viruses - 3; Other Eukaryotes - 3710 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2001289
IMP
Gene Ontologylipid X metabolic process1
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0009245
IEA
GOA Databaselipid A biosynthetic process
GO:0009245
IEA
InterProlipid A biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016410
IEA
Gene OntologyN-acyltransferase activity
GO:0016410
IEA
InterProN-acyltransferase activity
GO:0103118
IMP
Gene OntologyUDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity1
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA
Gene Ontologymitochondrion1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001451 Hexapeptide repeat
IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD
IPR011004 Trimeric LpxA-like superfamily
Mapman id Description
5.6.3 Lipid metabolism.lipid A biosynthesis.UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase (LpxD)