Gene: AT3G62970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G62970
  • Transcript Identifier AT3G62970.2
  • Gene Type Coding gene
  • Location Chr3 : 23270636-23272580 : positive

Gene Family Information

  • ID HOM05D000548
  • #Genes/#Species 997/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G62970.2
  • uniprot F4IZL5

Descriptions

  • Description zinc finger (C3HC4-type RING finger) family protein
  • Computational description zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CTCHY-type (InterPro:IPR017921), Zinc finger, CHY-type (InterPro:IPR008913), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: CHY-type/CTCHY-type/RING-type Zinc finger protein (TAIR:AT5G18650.1); Has 819 Blast hits to 814 proteins in 181 species: Archae - 0; Bacteria - 4; Metazoa - 266; Fungi - 146; Plants - 268; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
IEA
Gene Ontologyprotein ubiquitination1
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031109 Ring finger and CHY zinc finger domain-containing protein, plant
IPR001841 Zinc finger, RING-type
IPR008913 Zinc finger, CHY-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR037275 Zinc finger, CTCHY-type superfamily
IPR037274 Zinc finger, CHY-type superfamily
Mapman id Description
35.1 not assigned.annotated