Gene: AT3G60880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G60880
  • Transcript Identifier AT3G60880.2
  • Gene Type Coding gene
  • Location Chr3 : 22495086-22496542 : positive

Gene Family Information

  • ID HOM05D003135
  • #Genes/#Species 218/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G60880.2
  • symbol DHDPS1
  • Alias DHDPS,DIHYDRODIPICOLINATE SYNTHASE
  • uniprot Q9LZX6

Descriptions

  • Description dihydrodipicolinate synthase 1
  • Computational description dihydrodipicolinate synthase 1 (DHDPS1); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, metabolic process, diaminopimelate biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase (TAIR:AT2G45440.1); Has 13092 Blast hits to 13092 proteins in 2641 species: Archae - 342; Bacteria - 9390; Metazoa - 97; Fungi - 273; Plants - 96; Viruses - 0; Other Eukaryotes - 2894 (source: NCBI BLink).
  • Computational description dihydrodipicolinate synthase 1 (DHDPS1); FUNCTIONS IN: dihydrodipicolinate synthase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate, diaminopimelate biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Dihydrodipicolinate synthase subfamily (InterPro:IPR005263), Dihydrodipicolinate synthetase (InterPro:IPR002220), Dihydrodipicolinate synthetase, active site (InterPro:IPR020625), Dihydrodipicolinate synthetase, conserved site (InterPro:IPR020624); BEST Arabidopsis thaliana protein match is: dihydrodipicolinate synthase (TAIR:AT2G45440.1); Has 13228 Blast hits to 13228 proteins in 2671 species: Archae - 342; Bacteria - 9527; Metazoa - 96; Fungi - 273; Plants - 96; Viruses - 0; Other Eukaryotes - 2894 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process
GO:0009089
IEA
Gene Ontologylysine biosynthetic process via diaminopimelate
GO:0009089
IEA
InterProlysine biosynthetic process via diaminopimelate
GO:0019877
IEA
GOA Databasediaminopimelate biosynthetic process
GO:0009085
IEA
GOA Databaselysine biosynthetic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0008840
IEA
GOA Database4-hydroxy-tetrahydrodipicolinate synthase activity
GO:0008840
IDA
IBA
Gene Ontology4-hydroxy-tetrahydrodipicolinate synthase activity1 2
GO:0008840
IEA
InterPro4-hydroxy-tetrahydrodipicolinate synthase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0016829
IEA
InterProlyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002220 DapA-like
IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA
IPR013785 Aldolase-type TIM barrel
Mapman id Description
4.1.2.2.3.1 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate synthase