Gene: AT3G57520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G57520
  • Transcript Identifier AT3G57520.1
  • Gene Type Coding gene
  • Location Chr3 : 21288982-21292694 : negative

Gene Family Information

  • ID HOM05D000527
  • #Genes/#Species 1034/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G57520.1
  • symbol SIP2
  • Alias AtSIP2,seed imbibition 2,RS2,raffinose synthase 2
  • uniprot Q94A08

Descriptions

  • Description seed imbibition 2
  • Computational description seed imbibition 2 (SIP2); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 528 Blast hits to 504 proteins in 147 species: Archae - 29; Bacteria - 95; Metazoa - 0; Fungi - 82; Plants - 312; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
IEP
Gene Ontologyresponse to oxidative stress1
GO:0034484
IDA
Gene Ontologyraffinose catabolic process2
GO:0080167
IEP
GOA Databaseresponse to karrikin
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0047274
IDA
IEA
Gene Ontologygalactinol-sucrose galactosyltransferase activity2
GO:0052692
IDA
IBA
Gene Ontologyraffinose alpha-galactosidase activity2 3
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008811 Glycosyl hydrolases 36
IPR013785 Aldolase-type TIM barrel
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
3.4.4 Carbohydrate metabolism.oligosaccharide metabolism.raffinose alpha-galactosidase