Gene: AT3G55410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G55410
  • Transcript Identifier AT3G55410.1
  • Gene Type Coding gene
  • Location Chr3 : 20541897-20545728 : positive

Gene Family Information

  • ID HOM05D002389
  • #Genes/#Species 284/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G55410.1
  • uniprot F4IWV2

Descriptions

  • Description 2-oxoglutarate dehydrogenase, E1 component
  • Computational description 2-oxoglutarate dehydrogenase, E1 component; FUNCTIONS IN: oxoglutarate dehydrogenase (succinyl-transferring) activity, cobalt ion binding, zinc ion binding; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1 component (InterPro:IPR011603), Dehydrogenase, E1 component (InterPro:IPR001017), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999 Blast hits to 10962 proteins in 1954 species: Archae - 31; Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167; Viruses - 0; Other Eukaryotes - 5547 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006099
IEA
GOA Databasetricarboxylic acid cycle
GO:0006099
IBA
Gene Ontologytricarboxylic acid cycle1
GO:0006099
IEA
InterProtricarboxylic acid cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050897
IDA
GOA Databasecobalt ion binding
GO:0050897
HDA
Gene Ontologycobalt ion binding2
GO:0016624
IEA
GOA Databaseoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0016624
IEA
InterProoxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GO:0030976
IEA
Gene Ontologythiamine pyrophosphate binding
GO:0030976
IEA
InterProthiamine pyrophosphate binding
GO:0004591
IEA
GOA Databaseoxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0004591
IBA
Gene Ontologyoxoglutarate dehydrogenase (succinyl-transferring) activity1
GO:0004591
IEA
InterProoxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0008270
IDA
GOA Databasezinc ion binding
GO:0008270
HDA
Gene Ontologyzinc ion binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
ISM, IBA
Gene Ontologymitochondrion1 3
GO:0045252
IBA
Gene Ontologyoxoglutarate dehydrogenase complex1
GO:0005829
HDA
Gene Ontologycytosol4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011603 2-oxoglutarate dehydrogenase E1 component
IPR001017 Dehydrogenase, E1 component
IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain
IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal
IPR029061 Thiamin diphosphate-binding fold
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily
Mapman id Description
2.3.4.1 Cellular respiration.tricarboxylic acid cycle.2-oxoglutarate dehydrogenase complex.component E1