Gene: AT3G54980
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G54980
- Transcript Identifier AT3G54980.2
- Gene Type Coding gene
- Location Chr3 : 20370293-20372848 : positive
Gene Family Information
- ID HOM05D006287
- #Genes/#Species 127/82
- Phylogenetic origin
- ID ORTHO05D008192
- #Genes/#Species 122/81
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G54980.2
- uniprot Q9SV46
Descriptions
- Description Pentatricopeptide repeat (PPR) superfamily protein
- Computational description Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has 66577 Blast hits to 14412 proteins in 313 species: Archae - 5; Bacteria - 80; Metazoa - 1084; Fungi - 1336; Plants - 61678; Viruses - 0; Other Eukaryotes - 2394 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0009507 | IBA | Gene Ontology | chloroplast | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |