Gene: AT3G54690

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54690
  • Transcript Identifier AT3G54690.1
  • Gene Type Coding gene
  • Location Chr3 : 20246586-20247810 : positive

Gene Family Information

  • ID HOM05D004257
  • #Genes/#Species 167/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54690.1
  • symbol SETH3
  • uniprot Q9M1T1

Descriptions

  • Description Sugar isomerase (SIS) family protein
  • Computational description Sugar isomerase (SIS) family protein; FUNCTIONS IN: isomerase activity, sugar binding; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: KpsF/GutQ (InterPro:IPR004800), Sugar isomerase (SIS) (InterPro:IPR001347), Cystathionine beta-synthase, core (InterPro:IPR000644); Has 8722 Blast hits to 8719 proteins in 1857 species: Archae - 184; Bacteria - 5776; Metazoa - 15; Fungi - 131; Plants - 43; Viruses - 2; Other Eukaryotes - 2571 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:1901135
IEA
Gene Ontologycarbohydrate derivative metabolic process
GO:1901135
IEA
InterProcarbohydrate derivative metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019146
IEA
Gene Ontologyarabinose-5-phosphate isomerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0016853
IEA
InterProisomerase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0097367
IEA
GOA Databasecarbohydrate derivative binding
GO:0097367
IEA
InterProcarbohydrate derivative binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035474 KpsF-like, SIS domain
IPR004800 Phosphosugar isomerase, KdsD/KpsF-type
IPR000644 CBS domain
IPR001347 SIS domain
Mapman id Description
21.3.3.1.2.1 Cell wall organisation.pectin.rhamnogalacturonan II.biosynthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) biosynthesis.D-arabinose-5-phosphate isomerase