Gene: AT3G54440

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54440
  • Transcript Identifier AT3G54440.1
  • Gene Type Coding gene
  • Location Chr3 : 20148494-20157019 : negative

Gene Family Information

  • ID HOM05D005112
  • #Genes/#Species 147/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54440.1
  • uniprot Q8RWQ2

Descriptions

  • Description glycoside hydrolase family 2 protein
  • Computational description glycoside hydrolase family 2 protein; FUNCTIONS IN: carbohydrate binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, guard cell; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich (InterPro:IPR006102), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 42, domain 5 (InterPro:IPR004199), Glycoside hydrolase family 2, TIM barrel (InterPro:IPR006103), Glycoside hydrolase, family 2 (InterPro:IPR006101), Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain (InterPro:IPR013812), Galactose-binding domain-like (InterPro:IPR008979); Has 7598 Blast hits to 7490 proteins in 1389 species: Archae - 50; Bacteria - 5980; Metazoa - 182; Fungi - 208; Plants - 51; Viruses - 3; Other Eukaryotes - 1124 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0005990
IBA
Gene Ontologylactose catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016798
IEA
InterProhydrolase activity, acting on glycosyl bonds
GO:0030246
IEA
Gene Ontologycarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004565
IBA
IEA
Gene Ontologybeta-galactosidase activity1
GO:0004565
IEA
InterProbeta-galactosidase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009341
IBA
IEA
Gene Ontologybeta-galactosidase complex1
GO:0009341
IEA
InterProbeta-galactosidase complex
GO:0005829
HDA
RCA
Gene Ontologycytosol2 3
GO:0009507
HDA
Gene Ontologychloroplast4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006101 Glycoside hydrolase, family 2
IPR032312 Beta-galactosidase, domain 4
IPR004199 Beta galactosidase small chain/ domain 5
IPR011013 Galactose mutarotase-like domain superfamily
IPR036156 Beta-Galactosidase/glucuronidase domain superfamily
IPR008979 Galactose-binding-like domain superfamily
IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich
IPR013783 Immunoglobulin-like fold
IPR006104 Glycosyl hydrolases family 2, sugar binding domain
IPR017853 Glycoside hydrolase superfamily
IPR014718 Glycoside hydrolase-type carbohydrate-binding
IPR006103 Glycoside hydrolase family 2, catalytic domain
IPR023933 Glycoside hydrolase, family 2, beta-galactosidase
Mapman id Description
35.1 not assigned.annotated