Gene: AT3G53900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53900
  • Transcript Identifier AT3G53900.2
  • Gene Type Coding gene
  • Location Chr3 : 19956914-19959006 : negative

Gene Family Information

  • ID HOM05D005735
  • #Genes/#Species 135/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53900.2
  • symbol UPP
  • Alias PYRR,PYRIMIDINE R
  • uniprot Q9M336

Descriptions

  • Description uracil phosphoribosyltransferase
  • Computational description uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 6281 Blast hits to 6281 proteins in 2387 species: Archae - 194; Bacteria - 4412; Metazoa - 236; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink).
  • Computational description uracil phosphoribosyltransferase (UPP); FUNCTIONS IN: uracil phosphoribosyltransferase activity; INVOLVED IN: cellular response to phosphate starvation, developmental process, nucleoside metabolic process; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Uracil phosphoribosyl transferase (InterPro:IPR005765); BEST Arabidopsis thaliana protein match is: uridine kinase-like 5 (TAIR:AT3G27440.1); Has 6282 Blast hits to 6282 proteins in 2386 species: Archae - 194; Bacteria - 4411; Metazoa - 238; Fungi - 342; Plants - 200; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006223
IEA
Gene Ontologyuracil salvage
GO:0006223
IEA
InterProuracil salvage
GO:0009116
IEA
Gene Ontologynucleoside metabolic process
GO:0009116
IEA
InterPronucleoside metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0032502
IMP
Gene Ontologydevelopmental process1
GO:0016036
IEP
Gene Ontologycellular response to phosphate starvation2
GO:0044206
IEA
Gene OntologyUMP salvage

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004845
IEA
GOA Databaseuracil phosphoribosyltransferase activity
GO:0004845
IMP
IBA
Gene Ontologyuracil phosphoribosyltransferase activity1 3
GO:0004845
IEA
InterProuracil phosphoribosyltransferase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016757
IEA
GOA Databaseglycosyltransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003824
IEA
GOA Databasecatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IDA
Gene Ontologyplastid1
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
IBA
Gene Ontologycytosol3 4
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM, IBA
Gene Ontologychloroplast3 5
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma6
GO:0005737
IBA
Gene Ontologycytoplasm3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029057 Phosphoribosyltransferase-like
IPR000836 Phosphoribosyltransferase domain
IPR005765 Uracil phosphoribosyl transferase
Mapman id Description
6.2.2.2 Nucleotide metabolism.pyrimidines.salvage pathway.uracil phosphoribosyltransferase (UPP)