Gene: AT3G53750
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G53750
- Transcript Identifier AT3G53750.1
- Gene Type Coding gene
- Location Chr3 : 19915924-19917371 : positive
Gene Family Information
- ID HOM05D000173
- #Genes/#Species 2168/100
- Phylogenetic origin
- ID ORTHO05D000316
- #Genes/#Species 1131/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G53750.1
- symbol ACT3
- uniprot A0A384LCZ9
Descriptions
- Description actin 3
- Computational description actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0007010 | ISS TAS | Gene Ontology | cytoskeleton organization | 1 |
GO:0048589 | ISO | PLAZA Integrative Orthology | developmental growth | AT2G37620 |
GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT2G37620 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0005200 | ISS | Gene Ontology | structural constituent of cytoskeleton | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G37620 |
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G37620 |
GO:0005856 | IEA | GOA Database | cytoskeleton | |
GO:0005856 | TAS | Gene Ontology | cytoskeleton | |
GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 2 |
GO:0005829 | HDA RCA | Gene Ontology | cytosol | 3 4 |
GO:0009506 | HDA | Gene Ontology | plasmodesma | 5 |
GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 6 |
GO:0005634 | HDA | Gene Ontology | nucleus | 7 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
20.2.1 | Cytoskeleton organisation.microfilament network.actin filament protein |