Gene: AT3G53740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53740
  • Transcript Identifier AT3G53740.2
  • Gene Type Coding gene
  • Location Chr3 : 19913921-19914813 : negative

Gene Family Information

  • ID HOM05D001830
  • #Genes/#Species 358/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53740.2
  • uniprot Q9M352

Descriptions

  • Description Ribosomal protein L36e family protein
  • Computational description Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT2G37600.2); Has 732 Blast hits to 731 proteins in 255 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 135; Plants - 140; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
  • Computational description Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT2G37600.2); Has 756 Blast hits to 755 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 356; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0002181
IBA
Gene Ontologycytoplasmic translation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022625
IDA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
IBA
Gene Ontologycytosolic large ribosomal subunit1 2
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005829
IDA
GOA Databasecytosol
GO:0005829
HDA
Gene Ontologycytosol3
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome4
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0000325
HDA
Gene Ontologyplant-type vacuole5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038097 Ribosomal protein L36e domain superfamily
IPR000509 Ribosomal protein L36e
Mapman id Description
17.1.2.1.37 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL36