Gene: AT3G53730

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53730
  • Transcript Identifier AT3G53730.1
  • Gene Type Coding gene
  • Location Chr3 : 19912659-19912970 : negative

Gene Family Information

  • ID HOM05D000283
  • #Genes/#Species 1540/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53730.1
  • uniprot A0A384LKZ7

Descriptions

  • Description Histone superfamily protein
  • Computational description Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59690.1); Has 3178 Blast hits to 3178 proteins in 446 species: Archae - 0; Bacteria - 0; Metazoa - 1790; Fungi - 358; Plants - 490; Viruses - 6; Other Eukaryotes - 534 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT1G07660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G59970
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G07660
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G07660
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G07660
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G07660
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G07660
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G07660
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G07660
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000786
IEA
GOA Databasenucleosome
GO:0005694
IEA
GOA Databasechromosome
GO:0005829
HDA
RCA
Gene Ontologycytosol1 2
GO:0005794
RCA
Gene OntologyGolgi apparatus3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035425 CENP-T/Histone H4, histone fold
IPR001951 Histone H4
IPR009072 Histone-fold
Mapman id Description
12.1.1.4 Chromatin organisation.chromatin structure.DNA wrapping.histone (H4)