Gene: AT3G53270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G53270
  • Transcript Identifier AT3G53270.3
  • Gene Type Coding gene
  • Location Chr3 : 19750406-19752168 : negative

Gene Family Information

  • ID HOM05D004374
  • #Genes/#Species 163/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G53270.3
  • uniprot Q8RXK3

Descriptions

  • Description Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
  • Computational description Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein; CONTAINS InterPro DOMAIN/s: Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (InterPro:IPR019188); Has 91 Blast hits to 91 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 48; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042795
IBA
Gene OntologysnRNA transcription by RNA polymerase II1
GO:0042796
IBA
Gene OntologysnRNA transcription by RNA polymerase III1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0019185
IBA
Gene OntologysnRNA-activating protein complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019188 Small nuclear RNA activating complex (SNAPc), subunit SNAP43
Mapman id Description
15.3.3.7.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.SNAP snRNA transcription factor complex.component SNAPC1