Gene: AT3G48880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G48880
  • Transcript Identifier AT3G48880.2
  • Gene Type Coding gene
  • Location Chr3 : 18127873-18129008 : positive

Gene Family Information

  • ID HOM05D002077
  • #Genes/#Species 320/78
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G48880.2
  • uniprot Q9M2Z5

Descriptions

  • Description RNI-like superfamily protein
  • Computational description RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: RNI-like superfamily protein (TAIR:AT4G11580.1); Has 401 Blast hits to 392 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050829
IMP
Gene Ontologydefense response to Gram-negative bacterium1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:1905761
IPI
Gene OntologySCF ubiquitin ligase complex binding1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
Mapman id Description
35.1 not assigned.annotated