Gene: AT3G45940
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G45940
- Transcript Identifier AT3G45940.1
- Gene Type Coding gene
- Location Chr3 : 16886226-16889171 : negative
Gene Family Information
- ID HOM05D000595
- #Genes/#Species 943/100
- Phylogenetic origin
- ID ORTHO05D001274
- #Genes/#Species 442/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G45940.1
- uniprot F4J6T7
Descriptions
- Description Glycosyl hydrolases family 31 protein
- Computational description Glycosyl hydrolases family 31 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, sepal, pedicel, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 31 (InterPro:IPR000322), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: alpha-xylosidase 1 (TAIR:AT1G68560.1); Has 5440 Blast hits to 5077 proteins in 1113 species: Archae - 86; Bacteria - 3115; Metazoa - 813; Fungi - 823; Plants - 272; Viruses - 2; Other Eukaryotes - 329 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0000272 | IEA | GOA Database | polysaccharide catabolic process | |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | Gene Ontology | carbohydrate binding | |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IBA | Gene Ontology | hydrolase activity, hydrolyzing O-glycosyl compounds | 1 |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0061634 | IEA | Gene Ontology | alpha-D-xyloside xylohydrolase |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 2 |
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031727 | Galactose mutarotase, N-terminal barrel |
| IPR025887 | Glycoside hydrolase family 31, N-terminal domain |
| IPR000322 | Glycoside hydrolase family 31 |
| IPR013780 | Glycosyl hydrolase, all-beta |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR011013 | Galactose mutarotase-like domain superfamily |
| Mapman id | Description |
|---|---|
| 21.2.1.2.5 | Cell wall organisation.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase |