Gene: AT3G42660

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G42660
  • Transcript Identifier AT3G42660.1
  • Gene Type Coding gene
  • Location Chr3 : 14751280-14755701 : positive

Gene Family Information

  • ID HOM05D005717
  • #Genes/#Species 136/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G42660.1
  • uniprot F4JF14

Descriptions

  • Description transducin family protein / WD-40 repeat family protein
  • Computational description transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), Protein of unknown function DUF3639 (InterPro:IPR022100), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G23430.1); Has 41589 Blast hits to 20655 proteins in 706 species: Archae - 66; Bacteria - 8583; Metazoa - 14223; Fungi - 8894; Plants - 4578; Viruses - 3; Other Eukaryotes - 5242 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061087
IGI
Gene Ontologypositive regulation of histone H3-K27 methylation1
GO:0006261
IBA
Gene OntologyDNA-dependent DNA replication2
GO:0006281
IBA
Gene OntologyDNA repair2
GO:0000278
IBA
Gene Ontologymitotic cell cycle2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding
GO:0003682
IBA
Gene Ontologychromatin binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0043596
IBA
Gene Ontologynuclear replication fork2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR022100 Minichromosome loss protein Mcl1, middle region
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
12.3.6.1.5 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.core components.LHP1-regulatory component ELP1