Gene: AT3G18780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18780
  • Transcript Identifier AT3G18780.2
  • Gene Type Coding gene
  • Location Chr3 : 6475535-6476832 : positive

Gene Family Information

  • ID HOM05D000173
  • #Genes/#Species 2168/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18780.2
  • symbol ACT2
  • Alias DER1,DEFORMED ROOT HAIRS 1,ENL2,ENHANCER OF LRX1 2,FIZ2,FRIZZY AND KINKED SHOOTS 2,LSR2,LIGHT STRESS-REGULATED 2
  • uniprot Q96292

Descriptions

  • Description actin 2
  • Computational description actin 2 (ACT2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 8 (TAIR:AT1G49240.1); Has 14997 Blast hits to 14643 proteins in 3016 species: Archae - 6; Bacteria - 12; Metazoa - 5603; Fungi - 5165; Plants - 1589; Viruses - 2; Other Eukaryotes - 2620 (source: NCBI BLink).
  • Computational description actin 2 (ACT2); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: in 7 processes; LOCATED IN: nucleus, membrane, cytoplasm; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 8 (TAIR:AT1G49240.1); Has 15142 Blast hits to 14749 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5705; Fungi - 5217; Plants - 1599; Viruses - 2; Other Eukaryotes - 2601 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007010
IEA
GOA Databasecytoskeleton organization
GO:0048768
IMP
Gene Ontologyroot hair cell tip growth1
GO:0010218
IEP
Gene Ontologyresponse to far red light2
GO:0010114
IEP
Gene Ontologyresponse to red light2
GO:0009735
IEP
Gene Ontologyresponse to cytokinin3
GO:0010053
IMP
Gene Ontologyroot epidermal cell differentiation4
GO:0048767
IMP
Gene Ontologyroot hair elongation5
GO:0009644
IEP
Gene Ontologyresponse to high light intensity6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding7
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005200
TAS
Gene Ontologystructural constituent of cytoskeleton8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
ISM
Gene Ontologycytoplasm8
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
Gene Ontologynucleus9
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005829
HDA
RCA
Gene Ontologycytosol10 11

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043129 ATPase, nucleotide binding domain
IPR004000 Actin family
Mapman id Description
20.2.1 Cytoskeleton organisation.microfilament network.actin filament protein