Gene: AT3G18500

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18500
  • Transcript Identifier AT3G18500.4
  • Gene Type Coding gene
  • Location Chr3 : 6352544-6355297 : positive

Gene Family Information

  • ID HOM05D000762
  • #Genes/#Species 768/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18500.4
  • uniprot Q9LS39

Descriptions

  • Description DNAse I-like superfamily protein
  • Computational description DNAse I-like superfamily protein; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G73875.1); Has 1180 Blast hits to 1142 proteins in 213 species: Archae - 0; Bacteria - 8; Metazoa - 512; Fungi - 213; Plants - 283; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
Gene Ontologycatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004535
IEA
Gene Ontologypoly(A)-specific ribonuclease activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0000175
IBA
GOA Database3'-5'-exoribonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
IDA
Gene Ontologychloroplast1
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005135 Endonuclease/exonuclease/phosphatase
IPR036691 Endonuclease/exonuclease/phosphatase superfamily
Mapman id Description
35.1 not assigned.annotated