Gene: AT3G17170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G17170
  • Transcript Identifier AT3G17170.1
  • Gene Type Coding gene
  • Location Chr3 : 5853186-5854853 : negative

Gene Family Information

  • ID HOM05D006827
  • #Genes/#Species 118/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G17170.1
  • symbol RFC3
  • full_name REGULATOR OF FATTY-ACID COMPOSITION 3
  • uniprot Q948R9

Descriptions

  • Description Translation elongation factor EF1B/ribosomal protein S6 family protein
  • Computational description REGULATOR OF FATTY-ACID COMPOSITION 3 (RFC3); FUNCTIONS IN: structural constituent of ribosome, rRNA binding; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Ribosomal protein S6 (InterPro:IPR000529); Has 13593 Blast hits to 10425 proteins in 2441 species: Archae - 19; Bacteria - 4805; Metazoa - 3511; Fungi - 908; Plants - 375; Viruses - 253; Other Eukaryotes - 3722 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070181
IBA
Gene Ontologysmall ribosomal subunit rRNA binding1
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0022627
IBA
Gene Ontologycytosolic small ribosomal subunit1
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000529 Ribosomal protein S6
IPR035980 Ribosomal protein S6 superfamily
IPR020814 Ribosomal protein S6, plastid/chloroplast
IPR014717 Translation elongation factor EF1B/ribosomal protein S6
Mapman id Description
35.1 not assigned.annotated