Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 6.5e-150 534.3 315 100.0
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 8.8e-139 497.3 322 89.1
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 1.5e-130 469.9 313 89.5
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 7.7e-127 457.6 315 87.3
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 3.0e-123 445.7 314 81.5
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 2.0e-122 443.0 315 79.4
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 1.7e-118 429.9 312 82.1
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 1.7e-118 429.9 312 82.1
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 8.6e-118 427.6 312 81.7
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 2.2e-113 412.9 312 78.8
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 1.2e-111 407.1 230 90.9
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 1.5e-109 400.2 230 90.4
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 1.5e-109 400.2 230 86.5
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 2.3e-107 392.9 240 83.8
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 6.2e-92 341.7 239 72.4
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 1.6e-76 290.4 178 75.8
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 5.2e-75 285.4 252 59.5
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 5.2e-75 285.4 244 60.7
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 2.0e-74 283.5 252 59.1
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 9.9e-74 281.2 171 76.0
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 1.7e-73 280.4 237 62.9
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 6.4e-73 278.5 171 76.6
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 6.4e-73 278.5 252 58.3
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 6.4e-73 278.5 180 73.9
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 8.4e-73 278.1 255 57.6
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 1.1e-72 277.7 178 73.6
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 1.1e-72 277.7 178 71.9
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 1.4e-72 277.3 172 74.4
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 1.9e-72 276.9 188 70.7
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 3.2e-72 276.2 178 73.0
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 7.1e-72 275.0 236 62.3
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 9.3e-72 274.6 174 70.7
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 1.2e-71 274.2 180 72.2
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 1.6e-71 273.9 180 72.2
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 2.1e-71 273.5 179 71.5
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 7.8e-71 271.6 244 56.6
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 1.3e-70 270.8 171 73.7
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.7e-70 270.4 179 69.8
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 1.7e-70 270.4 180 71.7
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 2.3e-70 270.0 179 70.4
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 2.3e-70 270.0 178 70.2
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 2.3e-70 270.0 188 68.6
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 3.9e-70 269.2 178 70.2
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 3.9e-70 269.2 205 63.9
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 6.6e-70 268.5 178 70.2
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 1.5e-69 267.3 180 68.9
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 2.5e-69 266.5 180 68.9
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 2.5e-69 266.5 181 69.1
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 2.5e-69 266.5 220 63.2
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 3.3e-69 266.2 179 69.3
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 5.6e-69 265.4 204 62.7
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 9.6e-69 264.6 176 69.3
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 1.6e-68 263.8 171 72.5
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 2.1e-68 263.5 178 68.0
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 2.1e-68 263.5 178 68.0
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 2.8e-68 263.1 178 70.2
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 3.6e-68 262.7 180 69.4
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 3.6e-68 262.7 171 72.5
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 8.1e-68 261.5 171 69.0
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 8.1e-68 261.5 227 61.7
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 1.1e-67 261.2 199 64.3
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 1.4e-67 260.8 178 68.0
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.4e-67 260.8 199 63.3
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 3.1e-67 259.6 184 66.3
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 3.1e-67 259.6 179 67.6
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 5.3e-67 258.8 169 73.4
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 6.9e-67 258.5 170 72.4
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 1.2e-66 257.7 203 62.6
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 1.5e-66 257.3 170 71.2
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 2.0e-66 256.9 178 65.2
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 3.4e-66 256.1 178 66.3
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 4.5e-66 255.8 253 56.1
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 4.5e-66 255.8 178 66.3
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 5.8e-66 255.4 228 57.5
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 7.6e-66 255.0 179 67.0
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 2.2e-65 253.4 170 68.2
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 4.9e-65 252.3 173 69.9
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 6.4e-65 251.9 162 71.0
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 8.4e-65 251.5 221 58.8
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 8.4e-65 251.5 178 64.0
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 1.4e-64 250.8 180 66.7
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 1.4e-64 250.8 178 64.6
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 1.9e-64 250.4 167 70.1
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 3.2e-64 249.6 199 59.8
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 3.2e-64 249.6 178 65.2
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 5.4e-64 248.8 171 67.3
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 7.1e-64 248.4 186 62.4
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 1.2e-63 247.7 176 65.9
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 1.2e-63 247.7 172 66.3
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 8.7e-62 241.5 242 52.5
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 3.3e-61 239.6 250 52.4
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 2.8e-60 236.5 216 60.2
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 6.2e-60 235.3 161 69.6
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 1.4e-59 234.2 161 65.8
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 3.4e-58 229.6 214 60.7
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 4.9e-57 225.7 161 63.4
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 4.3e-53 212.6 147 68.7
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 8.2e-52 208.4 148 66.9
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 3.5e-47 193.0 118 75.4
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 3.5e-47 193.0 253 45.5
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 6.7e-46 188.7 324 43.5
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 6.3e-44 182.2 112 75.0
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 3.1e-43 179.9 118 68.6
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 6.1e-39 165.6 161 55.9
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 7.4e-37 158.7 145 66.2
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 1.7e-33 147.5 114 60.5
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 6.5e-33 145.6 154 56.5
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 2.5e-32 143.7 160 45.0
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 2.5e-32 143.7 160 45.0
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 9.4e-32 141.7 162 44.4
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 2.0e-26 124.0 146 43.2
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 3.8e-25 119.8 98 52.0
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 2.5e-24 117.1 86 60.5
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 2.0e-21 107.5 81 70.4
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 2.0e-21 107.5 81 70.4
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 1.2e-18 98.2 71 63.4
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 8.8e-14 82.0 101 41.6
BcaB06g25810 Brassica carinata HOM05D006827 ORTHO05D023991 1.7e-12 77.8 77 64.9
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 1.7e-12 77.8 59 57.6
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 9.1e-11 72.0 121 34.7
BolC5t33670H Brassica oleracea HOM05D064981 ORTHO05D023991 6.5e-09 65.9 111 41.4
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 1.5e-08 64.7 136 31.6
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 1.6e-07 61.2 104 33.7
C05p49290 Brassica napus HOM05D064981 ORTHO05D023991 4.7e-07 59.7 107 41.1


User provided reference genes

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