Gene: AT3G15790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G15790
  • Transcript Identifier AT3G15790.1
  • Gene Type Coding gene
  • Location Chr3 : 5343209-5344386 : positive

Gene Family Information

  • ID HOM05D000771
  • #Genes/#Species 762/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G15790.1
  • symbol MBD11
  • Alias ATMBD11
  • uniprot Q9LW00

Descriptions

  • Description methyl-CPG-binding domain 11
  • Computational description methyl-CPG-binding domain 11 (MBD11); FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 10 (TAIR:AT1G15340.1); Has 9357 Blast hits to 6006 proteins in 613 species: Archae - 14; Bacteria - 964; Metazoa - 3510; Fungi - 943; Plants - 531; Viruses - 98; Other Eukaryotes - 3297 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008327
ISS
Gene Ontologymethyl-CpG binding1
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001739 Methyl-CpG DNA binding
IPR016177 DNA-binding domain superfamily
IPR039622 Methyl-CpG-binding domain-containing protein 10/11
Mapman id Description
12.5.4.3 Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD10-11)