Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G15340 methyl-CPG-binding domain 10 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 10 (MBD10)%3B FUNCTIONS IN: methyl-CpG binding%2C DNA binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Methyl-CpG DNA binding (InterPro:IPR001739)%3B BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 11 (TAIR:AT3G15790.1)%3B Has 137026 Blast hits to 72034 proteins in 3183 species: Archae - 674%3B Bacteria - 27556%3B Metazoa - 48373%3B Fungi - 14456%3B Plants - 6804%3B Viruses - 747%3B Other Eukaryotes - 38416 (source: NCBI BLink). Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G410 LG-4 - View
Aethionema arabicum Aa31LG8G2990 LG-8 + View
Acer truncatum Atru.chr1.2978 chr1 - View
Acer truncatum Atru.chr7.2427 chr7 + View
Acer truncatum Atru.chr7.1127 chr7 - View
Actinidia chinensis Actinidia40484 Lachesis_group10 - View
Actinidia chinensis Actinidia15988 Lachesis_group9 + View
Actinidia chinensis Actinidia21973 Lachesis_group15 + View
Actinidia chinensis Actinidia01750 Lachesis_group1 + View
Arabidopsis lyrata AL3G28450 scaffold_3 + View
Avicennia marina MSTRG.4709 ScioBoG_102837_HRSCAF_103074 - View
Aquilegia oxysepala Aqoxy7G03675 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L2H1V2 arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X66ACT arahy.Tifrunner.gnm1.Arahy.08 + View
Brassica carinata BcaC09g48557 ChrC09 + View
Brassica carinata BcaB04g20903 ChrB04 - View
Brassica napus A01p38320 A01 - View
Brassica napus C01p48660 C01 - View
Brassica oleracea BolC1t04820H C1 - View
Brassica rapa BraA01t03883Z A01 - View
Brassica rapa BraA05t22184Z A05 - View
Capsicum annuum CAN.G407.89 PGAv.1.6.scaffold407 - View
Cannabis sativa CANSAT56G3778 NC_044371.1 + View
Cicer arietinum L. Ca_15739_v3 Ca_LG5_v3 + View
Corylus avellana Haze_25556 Similar to MBD11: Methyl-CpG-binding domain-containing protein 11 (Arabidopsis thaliana OX%3D3702) 8 - View
Corylus avellana Haze_16550 Similar to MBD11: Methyl-CpG-binding domain-containing protein 11 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_21517 Protein of unknown function 3 - View
Coffea canephora Cc04_g04330 Putative uncharacterized protein chr4 + View
Coffea canephora Cc06_g08300 Putative uncharacterized protein chr6 - View
Citrus clementina Ciclev10007591m.g scaffold_1 - View
Citrus clementina Ciclev10025929m.g scaffold_7 + View
Citrus clementina Ciclev10010753m.g scaffold_1 - View
Carpinus fangiana Cfa003393 Cfa01 + View
Carpinus fangiana Cfa001971 Cfa01 - View
Cardamine hirsuta CARHR090880 methyl-CPG-binding domain 11 Chr3 + View
Carya illinoinensis CiPaw.04G172700 PF01429 - Methyl-CpG binding domain (MBD) Chr04 + View
Carya illinoinensis CiPaw.07G223400 PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Chr07 + View
Carya illinoinensis CiPaw.03G245800 PF01429 - Methyl-CpG binding domain (MBD) Chr03 + View
Carya illinoinensis CiPaw.02G156900 PTHR33729:SF1 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Chr02 + View
Carya illinoinensis CiPaw.01G247100 PTHR33729:SF1 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Chr01 + View
Citrullus lanatus ClCG11G003150 Methyl binding domain protein CG_Chr11 + View
Citrullus lanatus ClCG06G011310 methyl-CPG-binding domain 10 LENGTH=384 CG_Chr06 + View
Citrullus lanatus ClCG09G002910 Methyl binding domain protein CG_Chr09 + View
Cucumis melo MELO3C004492.2 methyl-CpG-binding domain-containing protein 11-like chr05 - View
Cucumis melo MELO3C023419.2 methyl-CpG-binding domain-containing protein 11 chr01 - View
Cucumis melo MELO3C010329.2 methyl-CpG-binding domain-containing protein 11-like chr02 - View
Corchorus olitorius COL.COLO4_12958 Methyl-CpG DNA binding protein AWUE01014983.1 + View
Chenopodium quinoa AUR62011150 MBD10: Methyl-CpG-binding domain-containing protein 10 C_Quinoa_Scaffold_3799 + View
Capsella rubella Carub.0001s1509 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 scaffold_1 - View
Capsella rubella Carub.0003s1553 PF01429 - Methyl-CpG binding domain (MBD) scaffold_3 + View
Cucumis sativus L. CsaV3_7G032420 methyl-CpG-binding domain-containing protein 11 chr7 - View
Cucumis sativus L. CsaV3_2G032120 EEIG1/EHBP1 N-terminal domain protein chr2 + View
Cucumis sativus L. CsaV3_2G002970 methyl-CpG-binding domain-containing protein 11-like chr2 + View
Cucumis sativus L. CsaV3_4G001590 methyl-CpG-binding domain-containing protein 11-like chr4 + View
Davidia involucrata Dinv30600 GWHABJS00000019 - View
Davidia involucrata Dinv38118 GWHABJS00000006 - View
Davidia involucrata Dinv41494 GWHABJS00000013 - View
Davidia involucrata Dinv36506 GWHABJS00000001 - View
Durio zibethinus Duzib160G0079 NW_019168015.1 - View
Durio zibethinus Duzib192G0222 NW_019168037.1 - View
Durio zibethinus Duzib187G1926 NW_019167860.1 - View
Durio zibethinus Duzib150G1691 NW_019167882.1 + View
Durio zibethinus Duzib235G0668 NW_019167982.1 - View
Erythranthe guttata Migut.D01073 scaffold_4 + View
Fragaria x ananassa FAN09G0010 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Fvb6-2 + View
Fragaria x ananassa FAN14G0554 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Fvb6-1 + View
Fragaria x ananassa FAN05G2834 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Fvb6-3 + View
Fragaria x ananassa FAN27G1739 PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Fvb2-1 - View
Fragaria x ananassa FAN02G0149 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Fvb6-4 - View
Fragaria x ananassa FAN19G0593 PF01429 - Methyl-CpG binding domain (MBD) Fvb1-4 - View
Fragaria vesca FvH4_1g03020 PF01429 - Methyl-CpG binding domain (MBD) Fvb1 - View
Fragaria vesca FvH4_6g29820 PTHR33729:SF1 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Fvb6 - View
Gossypium hirsutum Gohir.A06G054800 PF01429 - Methyl-CpG binding domain (MBD) A06 - View
Gossypium hirsutum Gohir.A09G085200 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 A09 + View
Gossypium hirsutum Gohir.A10G073600 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 A10 - View
Gossypium hirsutum Gohir.D10G077500 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 D10 + View
Gossypium hirsutum Gohir.D09G085200 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 D09 + View
Gossypium hirsutum Gohir.A05G015300 PF01429 - Methyl-CpG binding domain (MBD) A05 - View
Gossypium hirsutum Gohir.D05G016400 PF01429 - Methyl-CpG binding domain (MBD) D05 - View
Glycine max Glyma.15G007700 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Gm15 - View
Glycine max Glyma.13G365500 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Gm13 + View
Glycine max Glyma.06G068000 Gm06 - View
Glycine max Glyma.04G066600 Gm04 - View
Gossypium raimondii Gorai.010G062800 Chr10 - View
Gossypium raimondii Gorai.006G101100 Chr06 + View
Gossypium raimondii Gorai.011G083900 Chr11 + View
Gossypium raimondii Gorai.009G016600 Chr09 - View
Lupinus albus Lalb_Chr13g0301751 PF01429 - Methyl-CpG binding domain (MBD) Lalb_Chr13 - View
Lupinus albus Lalb_Chr01g0012381 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Lalb_Chr01 - View
Lotus japonicus Lj4g0000070 PF01429 - Methyl-CpG binding domain (MBD) chr4 - View
Lotus japonicus Lj3g0018638 PTHR33729//PTHR33729:SF1 - FAMILY NOT NAMED // METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 chr3 + View
Lotus japonicus Lj1g0022227 chr1 + View
Lonicera japonica Lj5C71G8 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_8_59200 Lsat_1_v8_lg_8 + View
Magnolia biondii MBI01_g29251_MAGBIO AED:0.22 Chr01 + View
Malus domestica MD15G1171000 methyl-CPG-binding domain 10 Chr15 - View
Malus domestica MD17G1210700 methyl-CPG-binding domain 10 Chr17 + View
Manihot esculenta Manes.04G113200 Chromosome04 - View
Manihot esculenta Manes.11G056200 Chromosome11 + View
Manihot esculenta Manes.06G057100 Chromosome06 - View
Medicago truncatula Medtr4g010210 methyl-CpG-binding domain protein chr4 - View
Nelumbo nucifera Nn2g12066 chr2 + View
Nelumbo nucifera Nn8g39485 chr8 + View
Olea europaea Oeu000426.1 chr17 - View
Petunia axillaris Peaxi162Scf00332g00710 methyl-CPG-binding domain 10 Peaxi162Scf00332 - View
Prunus persica Prupe.3G086000 PTHR33729:SF1 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Pp03 + View
Prunus persica Prupe.7G245300 PF01429 - Methyl-CpG binding domain (MBD) Pp07 + View
Populus trichocarpa Potri.018G027200 PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Chr18 - View
Populus trichocarpa Potri.001G192300 PF01429 - Methyl-CpG binding domain (MBD) Chr01 - View
Populus trichocarpa Potri.006G067700 PF01429 - Methyl-CpG binding domain (MBD) Chr06 - View
Phaseolus vulgaris Phvul.009G092800 Chr09 - View
Phaseolus vulgaris Phvul.010G155700 PTHR33729:SF1 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 10 Chr10 + View
Quercus lobata QL02p088992 CM012294 + View
Quercus lobata QL05p029652 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0135641 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr2g0088151 RcHm_v2.0_Chr2 - View
Salix brachista Sabra18G0029600 GWHAAZH00000018 - View
Salix brachista Sabra18G0110200 GWHAAZH00000018 - View
Simmondsia chinensis Sc18g0000480 GWHAASQ00000018 - View
Sechium edule Sed0018562 LG09 - View
Solanum lycopersicum Solyc06g068140.3 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *** A0A2G2ZBW5_CAPAN) SL4.0ch06 + View
Solanum lycopersicum Solyc03g116680.3 Methyl-CpG-binding domain-containing protein 11 (AHRD V3.3 *** A0A2G2WQS8_CAPBA) SL4.0ch03 + View
Schrenkiella parvula Sp3g14110 PF01429 - Methyl-CpG binding domain (MBD) ch3-1 + View
Solanum pennellii Sopen06g025410 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. | methyl-CPG-binding domain 10 (MBD10) | FUNCTIONS IN: methyl-CpG binding, DNA binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Methyl-CpG DNA binding | BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 11 . Spenn-ch06 + View
Solanum pennellii Sopen03g035590 hypothetical protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400028533 Nucleosome-binding protein ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400000619 Nucleosome-binding protein ST4.03ch03 + View
Trochodendron aralioides TAR636G1710 group1 - View
Trochodendron aralioides TAR626G1272 group3 + View
Trochodendron aralioides TAR383G1099 group10 - View
Trochodendron aralioides TAR625G0253 group4 - View
Theobroma cacao Thecc.06G022500 Methyl-CPG-binding domain 10 Chromosome_6 + View
Theobroma cacao Thecc.09G128800 Methyl-CPG-binding domain 10 Chromosome_9 + View
Theobroma cacao Thecc.09G024700 Uncharacterized protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104812505 methyl-CpG-binding domain-containing protein 10-like NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104813565 methyl-CpG-binding domain-containing protein 10 NW_010965373.1 - View
Tarenaya hassleriana THA.LOC104818025 methyl-CpG-binding domain-containing protein 11 isoform X1 NW_010966021.1 - View
Trifolium pratense TPR.G38670 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI18G1397 NC_052241.1 + View
Tripterygium wilfordii TWI75G0465 NC_052253.1 + View
Tripterygium wilfordii TWI12G1245 NC_052243.1 - View
Tripterygium wilfordii TWI34G0240 NC_052235.1 + View
Tripterygium wilfordii TWI63G0183 NC_052240.1 + View
Vaccinium macrocarpon vmacro11175 Protein of unknown function chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20573 Similar to MBD10: Methyl-CpG-binding domain-containing protein 10 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G0470 CM024078.1 - View
Vitis vinifera GSVIVG01015565001 chr11 - View
Vitis vinifera GSVIVG01017330001 chr9 + View