Gene: AT3G13550

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G13550
  • Transcript Identifier AT3G13550.1
  • Gene Type Coding gene
  • Location Chr3 : 4423569-4424797 : negative

Gene Family Information

  • ID HOM05D000050
  • #Genes/#Species 4474/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G13550.1
  • symbol FUS9
  • Alias CIN4,CYTOKININ-INSENSITIVE 4,COP10,CONSTITUTIVE PHOTOMORPHOGENIC 10,EMB144,EMBRYO DEFECTIVE 144
  • full_name FUSCA 9
  • uniprot Q9LJD7

Descriptions

  • Description Ubiquitin-conjugating enzyme family protein
  • Computational description FUSCA 9 (FUS9); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 29 (TAIR:AT2G16740.1); Has 10317 Blast hits to 10310 proteins in 396 species: Archae - 0; Bacteria - 0; Metazoa - 4584; Fungi - 2034; Plants - 2020; Viruses - 23; Other Eukaryotes - 1656 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010099
IMP
Gene Ontologyregulation of photomorphogenesis1
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination2
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0010017
IEA
GOA Databasered or far-red light signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISS
Gene Ontologyubiquitin-protein transferase activity3
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR000608 Ubiquitin-conjugating enzyme E2
Mapman id Description
19.2.2.8.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.COP10-DET1 module.E2 conjugating enzyme variant component COP10