Gene: AT3G12410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G12410
  • Transcript Identifier AT3G12410.1
  • Gene Type Coding gene
  • Location Chr3 : 3946267-3946959 : negative

Gene Family Information

  • ID HOM05D000886
  • #Genes/#Species 676/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G12410.1
  • uniprot Q9LHG7

Descriptions

  • Description Polynucleotidyl transferase, ribonuclease H-like superfamily protein
  • Computational description Polynucleotidyl transferase, ribonuclease H-like superfamily protein; FUNCTIONS IN: 3'-5' exonuclease activity, nucleic acid binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), 3'-5' exonuclease (InterPro:IPR002562); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G12460.1); Has 208 Blast hits to 196 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 197; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0006139
ISO
PLAZA Homology (enrichment)nucleobase-containing compound metabolic process HOM05D000886

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IBA
Gene Ontology3'-5' exonuclease activity1
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012337 Ribonuclease H-like superfamily
IPR036397 Ribonuclease H superfamily
Mapman id Description
35.1 not assigned.annotated