Gene: AT3G09840

General Information

Computational description cell division cycle 48 (CDC48); FUNCTIONS IN: ATPase activity, identical protein binding; INVOLVED IN: response to cadmium ion, pollen germination, pollen tube growth, cell division, phosphorylation; LOCATED IN: in 9 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338), ATPase, AAA-type, CDC48 (InterPro:IPR005938); BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein (TAIR:AT5G03340.1); Has 66378 Blast hits to 39099 proteins in 3298 species: Archae - 1713; Bacteria - 29252; Metazoa - 8676; Fungi - 6302; Plants - 5800; Viruses - 77; Other Eukaryotes - 14558 (source: NCBI BLink).

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030433	IBA	Gene Ontology	ubiquitin-dependent ERAD pathway	1
GO:0051228	IBA	Gene Ontology	mitotic spindle disassembly	1
GO:0046686	IEP	GOA Database	response to cadmium ion
GO:0007049	IEA	GOA Database	cell cycle
GO:0051301	IEA	GOA Database	cell division
GO:0051301	IMP	Gene Ontology	cell division	2
GO:0015031	IEA	GOA Database	protein transport
GO:0009846	IMP	Gene Ontology	pollen germination	2
GO:0009860	IMP	Gene Ontology	pollen tube growth	2
GO:0031348	IMP	Gene Ontology	negative regulation of defense response	3
GO:0031648	IMP	Gene Ontology	protein destabilization	3
GO:0030970	IBA	Gene Ontology	retrograde protein transport, ER to cytosol	1
GO:0097352	IBA	Gene Ontology	autophagosome maturation	1
GO:0071712	IBA	Gene Ontology	ER-associated misfolded protein catabolic process	1

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016887	IBA	Gene Ontology	ATP hydrolysis activity	1
GO:0016887	IEA	InterPro	ATP hydrolysis activity
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0016787	IEA	Gene Ontology	hydrolase activity
GO:0016787	IEA	InterPro	hydrolase activity
GO:0005515	IPI	Gene Ontology	protein binding	4
GO:0042802	IPI	Gene Ontology	identical protein binding	5
GO:0031593	IBA	Gene Ontology	polyubiquitin modification-dependent protein binding	1

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	IDA	GOA Database	cytosol
GO:0005829	HDA IBA	Gene Ontology	cytosol	1 6
GO:0005634	IEA	GOA Database	nucleus
GO:0005634	IDA IBA	Gene Ontology	nucleus	1 7
GO:0005886	IDA IEA	GOA Database	plasma membrane
GO:0005886	HDA ISM	Gene Ontology	plasma membrane	8
GO:0009524	IEA	GOA Database	phragmoplast
GO:0009524	IDA	Gene Ontology	phragmoplast	2
GO:0005618	IDA	GOA Database	cell wall
GO:0005794	IDA	GOA Database	Golgi apparatus
GO:0005794	HDA	Gene Ontology	Golgi apparatus	9
GO:0022626	IDA	GOA Database	cytosolic ribosome
GO:0022626	HDA	Gene Ontology	cytosolic ribosome	10
GO:0034098	IBA	Gene Ontology	VCP-NPL4-UFD1 AAA ATPase complex	1
GO:0009506	IDA	GOA Database	plasmodesma
GO:0009506	HDA	Gene Ontology	plasmodesma	11
GO:0005856	IEA	GOA Database	cytoskeleton
GO:0016020	IEA	GOA Database	membrane
GO:0005737	IEA	GOA Database	cytoplasm
GO:0005737	IDA	Gene Ontology	cytoplasm	7
GO:0009505	HDA	Gene Ontology	plant-type cell wall	12
GO:0005635	IDA	Gene Ontology	nuclear envelope	2
GO:0005730	IDA	Gene Ontology	nucleolus	2
GO:0005819	IDA	Gene Ontology	spindle	2
GO:0005811	IDA	Gene Ontology	lipid droplet	13

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR005938	AAA ATPase, CDC48 family
IPR009010	Aspartate decarboxylase-like domain superfamily
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR003593	AAA+ ATPase domain
IPR029067	CDC48 domain 2-like superfamily
IPR004201	CDC48, domain 2
IPR041569	AAA ATPase, AAA+ lid domain
IPR003959	ATPase, AAA-type, core
IPR003338	CDC48, N-terminal subdomain

Mapman id	Description
19.2.4.1.1	Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48