Gene: AT3G09100
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G09100
- Transcript Identifier AT3G09100.2
- Gene Type Coding gene
- Location Chr3 : 2788435-2792913 : negative
Gene Family Information
- ID HOM05D001476
- #Genes/#Species 430/100
- Phylogenetic origin
- ID ORTHO05D002681
- #Genes/#Species 270/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT3G09100.2
- uniprot F4IYM6
Descriptions
- Description mRNA capping enzyme family protein
- Computational description mRNA capping enzyme family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity, mRNA guanylyltransferase activity, polynucleotide 5'-phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, mRNA processing, mRNA capping, dephosphorylation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 815 Blast hits to 810 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 317; Fungi - 230; Plants - 80; Viruses - 64; Other Eukaryotes - 124 (source: NCBI BLink).
- Computational description mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006470 | IEA | GOA Database | protein dephosphorylation | |
| GO:0006470 | IEA | InterPro | protein dephosphorylation | |
| GO:0016311 | IEA | GOA Database | dephosphorylation | |
| GO:0016311 | IEA | InterPro | dephosphorylation | |
| GO:0006370 | IBA IEA | Gene Ontology | 7-methylguanosine mRNA capping | 1 |
| GO:0006370 | IEA | InterPro | 7-methylguanosine mRNA capping | |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0006266 | IEA | GOA Database | DNA ligation | |
| GO:0035335 | IEA | GOA Database | peptidyl-tyrosine dephosphorylation | |
| GO:0098507 | IEA | GOA Database | polynucleotide 5' dephosphorylation | |
| GO:0006310 | IEA | Gene Ontology | DNA recombination | |
| GO:0006281 | IEA | Gene Ontology | DNA repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004651 | IEA | Gene Ontology | polynucleotide 5'-phosphatase activity | |
| GO:0004651 | IEA | InterPro | polynucleotide 5'-phosphatase activity | |
| GO:0008138 | IEA | Gene Ontology | protein tyrosine/serine/threonine phosphatase activity | |
| GO:0008138 | IEA | InterPro | protein tyrosine/serine/threonine phosphatase activity | |
| GO:0005524 | IEA | Gene Ontology | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004484 | IBA IEA | Gene Ontology | mRNA guanylyltransferase activity | 1 |
| GO:0004484 | IEA | InterPro | mRNA guanylyltransferase activity | |
| GO:0016791 | IEA | GOA Database | phosphatase activity | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0004721 | IEA | GOA Database | phosphoprotein phosphatase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003910 | IEA | Gene Ontology | DNA ligase (ATP) activity | |
| GO:0004725 | IEA | Gene Ontology | protein tyrosine phosphatase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 2 |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001339 | mRNA capping enzyme, adenylation domain |
| IPR029021 | Protein-tyrosine phosphatase-like |
| IPR000340 | Dual specificity phosphatase, catalytic domain |
| IPR017074 | mRNA capping enzyme, bifunctional |
| IPR013846 | mRNA capping enzyme, C-terminal |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR020422 | Dual specificity protein phosphatase domain |
| Mapman id | Description |
|---|---|
| 16.1.1 | RNA processing.RNA 5'-end capping.mRNA capping enzyme |