Gene: AT3G09080

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G09080
  • Transcript Identifier AT3G09080.3
  • Gene Type Coding gene
  • Location Chr3 : 2776259-2781785 : negative

Gene Family Information

  • ID HOM05D007125
  • #Genes/#Species 111/78
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G09080.3
  • uniprot Q9SS79

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 14743 Blast hits to 9426 proteins in 454 species: Archae - 42; Bacteria - 3876; Metazoa - 4498; Fungi - 2945; Plants - 1499; Viruses - 0; Other Eukaryotes - 1883 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
Mapman id Description
35.1 not assigned.annotated