Gene: AT3G06710
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G06710
- Transcript Identifier AT3G06710.1
- Gene Type Coding gene
- Location Chr3 : 2118767-2119613 : positive
Gene Family Information
- ID HOM05D002471
- #Genes/#Species 275/96
- Phylogenetic origin
- ID ORTHO05D016623
- #Genes/#Species 10/6
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G06710.1
- uniprot Q6E260
Descriptions
- Description E3 ubiquitin ligase
- Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 15 Blast hits to 15 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030433 | IBA | Gene Ontology | ubiquitin-dependent ERAD pathway | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D002471 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0030176 | IBA | Gene Ontology | integral component of endoplasmic reticulum membrane | 1 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |