Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G06710 Arabidopsis thaliana HOM05D002471 ORTHO05D016623 1.3e-140 503.1 246 100.0
CARHR081300 Cardamine hirsuta HOM05D002471 ORTHO05D011298 2.6e-69 266.2 244 55.3
AL3G17760 Arabidopsis lyrata HOM05D002471 ORTHO05D011298 6.0e-50 201.8 248 45.6
BraA05t22586Z Brassica rapa HOM05D002471 ORTHO05D011298 3.9e-49 199.1 249 45.8
A05p37920 Brassica napus HOM05D002471 ORTHO05D011298 5.0e-49 198.7 249 46.2
A05p41380 Brassica napus HOM05D002471 ORTHO05D011298 3.7e-44 182.6 237 44.3
BraA05t22859Z Brassica rapa HOM05D002471 ORTHO05D011298 6.4e-44 181.8 237 44.7
C05p60590 Brassica napus HOM05D002471 ORTHO05D011298 1.5e-40 170.6 250 42.4
BraA03t12659Z Brassica rapa HOM05D002471 ORTHO05D011298 2.8e-39 166.4 232 44.4
A03p34780 Brassica napus HOM05D002471 ORTHO05D011298 2.0e-37 160.2 236 43.2
C05p60600 Brassica napus HOM05D002471 ORTHO05D011298 2.0e-37 160.2 237 41.4
Thhalv10022280m.g Eutrema salsugineum HOM05D002471 ORTHO05D011298 5.8e-37 158.7 240 40.8
BolC5t34717H Brassica oleracea HOM05D002471 ORTHO05D011298 2.4e-27 126.7 195 42.1
Carub.0006s2275 Capsella rubella HOM05D002471 ORTHO05D011298 7.3e-24 115.2 245 33.1
Thhalv10020048m.g Eutrema salsugineum HOM05D002471 ORTHO05D011298 1.2e-21 107.8 246 32.1
Aa31LG2G16950 Aethionema arabicum HOM05D002471 ORTHO05D011298 2.0e-21 107.1 241 32.8
A01p05680 Brassica napus HOM05D002471 ORTHO05D011298 2.6e-21 106.7 252 31.3
BraA01t00538Z Brassica rapa HOM05D002471 ORTHO05D011298 2.6e-21 106.7 252 31.3
BraA01t00537Z Brassica rapa HOM05D002471 ORTHO05D011298 3.9e-17 92.8 245 29.8
AL7G19070 Arabidopsis lyrata HOM05D002471 ORTHO05D011298 2.8e-15 86.7 241 29.0
A01p05670 Brassica napus HOM05D002471 ORTHO05D011298 6.2e-15 85.5 248 28.2
AT4G32670 Arabidopsis thaliana HOM05D002471 ORTHO05D011298 1.4e-14 84.3 241 28.2
BcaC09g52061 Brassica carinata HOM05D002471 ORTHO05D011298 1.8e-14 84.0 248 30.6
BolC1t00622H Brassica oleracea HOM05D002471 ORTHO05D011298 6.9e-14 82.0 245 27.8
BcaC09g52060 Brassica carinata HOM05D002471 ORTHO05D011298 1.2e-13 81.3 229 31.0
C03p42350 Brassica napus HOM05D002471 ORTHO05D016623 2.0e-13 80.5 167 32.9
A01p03350 Brassica napus HOM05D002471 ORTHO05D098226 3.4e-13 79.7 201 31.8
THA.LOC104827264 Tarenaya hassleriana HOM05D002471 ORTHO05D011298 1.3e-12 77.8 248 27.0
C01p06240 Brassica napus HOM05D002471 ORTHO05D011298 2.9e-12 76.6 245 27.3
A05p41370 Brassica napus HOM05D002471 ORTHO05D016623 3.8e-12 76.3 153 33.3
C03p42340 Brassica napus HOM05D002471 ORTHO05D011298 1.2e-10 71.2 62 66.1
BolC1t00624H Brassica oleracea HOM05D002471 ORTHO05D011298 5.1e-09 65.9 184 28.8
BraA05t22858Z Brassica rapa HOM05D002471 ORTHO05D016623 1.3e-07 61.2 65 41.5
BolC5t34714H Brassica oleracea HOM05D002471 ORTHO05D016623 2.8e-07 60.1 60 43.3
CARHR240650 Cardamine hirsuta HOM05D002471 ORTHO05D011298 9.0e-06 55.1 123 30.1


User provided reference genes

Program Settings