Gene: AT3G06720

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06720
  • Transcript Identifier AT3G06720.2
  • Gene Type Coding gene
  • Location Chr3 : 2120559-2123555 : positive

Gene Family Information

  • ID HOM05D000768
  • #Genes/#Species 765/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06720.2
  • symbol IMPA-1
  • Alias AIMP ALPHA,IMPORTIN ALPHA,AT-IMP,ATKAP ALPHA,IMPA1,IMPORTIN ALPHA ISOFORM 1
  • uniprot Q96321

Descriptions

  • Description importin alpha isoform 1
  • Computational description importin alpha isoform 1 (IMPA-1); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4061 Blast hits to 2975 proteins in 282 species: Archae - 4; Bacteria - 22; Metazoa - 1539; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink).
  • Computational description AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006606
IEA
GOA Databaseprotein import into nucleus
GO:0006606
IDA
Gene Ontologyprotein import into nucleus1
GO:0006606
IEA
InterProprotein import into nucleus
GO:0015031
IEA
GOA Databaseprotein transport
GO:0006607
IBA
Gene OntologyNLS-bearing protein import into nucleus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061608
IEA
GOA Databasenuclear import signal receptor activity
GO:0061608
IBA
Gene Ontologynuclear import signal receptor activity2
GO:0061608
IEA
InterPronuclear import signal receptor activity
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding
GO:0008139
IBA
Gene Ontologynuclear localization sequence binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IDA
GOA Databasecell wall
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus2
GO:0005829
IDA
GOA Databasecytosol
GO:0005730
IDA
GOA Databasenucleolus
GO:0005730
HDA
Gene Ontologynucleolus4
GO:0005635
IEA
GOA Databasenuclear envelope
GO:0005635
IDA
Gene Ontologynuclear envelope1
GO:0009505
HDA
Gene Ontologyplant-type cell wall5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000225 Armadillo
IPR032413 Atypical Arm repeat
IPR011989 Armadillo-like helical
IPR036975 Importin-alpha, importin-beta-binding domain superfamily
IPR024931 Importin subunit alpha
IPR002652 Importin-alpha, importin-beta-binding domain
IPR016024 Armadillo-type fold
Mapman id Description
23.5.1.2.1 Protein translocation.nucleus.nucleocytoplasmic transport.cargo receptor activities.import karyopherin (IMPA)