Gene: AT3G04600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04600
  • Transcript Identifier AT3G04600.1
  • Gene Type Coding gene
  • Location Chr3 : 1243152-1245958 : positive

Gene Family Information

  • ID HOM05D003334
  • #Genes/#Species 205/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04600.1
  • uniprot Q9SR15

Descriptions

  • Description Nucleotidylyl transferase superfamily protein
  • Computational description Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: tryptophan-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, tryptophanyl-tRNA aminoacylation; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 2279 Blast hits to 2207 proteins in 761 species: Archae - 485; Bacteria - 802; Metazoa - 304; Fungi - 268; Plants - 65; Viruses - 5; Other Eukaryotes - 350 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006436
ISS, IBA
IEA
Gene Ontologytryptophanyl-tRNA aminoacylation1 2
GO:0006436
IEA
InterProtryptophanyl-tRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004830
IBA
IEA
Gene Ontologytryptophan-tRNA ligase activity2
GO:0004830
IEA
InterProtryptophan-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm2
GO:0005829
IDA
IEA
GOA Databasecytosol
GO:0005829
HDA
ISS
Gene Ontologycytosol1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
IPR002306 Tryptophan-tRNA ligase
IPR002305 Aminoacyl-tRNA synthetase, class Ic
Mapman id Description
17.2.20 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase