Gene: AT3G04590

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G04590
  • Transcript Identifier AT3G04590.2
  • Gene Type Coding gene
  • Location Chr3 : 1239245-1241603 : negative

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G04590.2
  • Alias AHL14,AT-hook motif nuclear localized protein 14
  • uniprot A1L4X7

Descriptions

  • Description AT hook motif DNA-binding family protein
  • Computational description AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT hook motif DNA-binding family protein (TAIR:AT2G33620.4); Has 3258 Blast hits to 2940 proteins in 204 species: Archae - 0; Bacteria - 25; Metazoa - 1636; Fungi - 293; Plants - 789; Viruses - 3; Other Eukaryotes - 512 (source: NCBI BLink).
  • Computational description AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: DNA-binding family protein (TAIR:AT5G28590.1); Has 3387 Blast hits to 3069 proteins in 223 species: Archae - 0; Bacteria - 59; Metazoa - 1696; Fungi - 298; Plants - 799; Viruses - 15; Other Eukaryotes - 520 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IEA
Gene Ontologyminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005575
ND
Gene Ontologycellular_component
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR039605 AT-hook motif nuclear-localized protein
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)