Gene: AT2G39890
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G39890
- Transcript Identifier AT2G39890.2
- Gene Type Coding gene
- Location Chr2 : 16656022-16658202 : positive
Gene Family Information
- ID HOM05D001949
- #Genes/#Species 339/94
- Phylogenetic origin
- ID ORTHO05D003065
- #Genes/#Species 246/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT2G39890.2
- symbol PROT1
- Alias ATPROT1,PROLINE TRANSPORTER 1
- uniprot P92961
Descriptions
- Description proline transporter 1
- Computational description proline transporter 1 (PROT1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
- Computational description proline transporter 1 (PROT1); FUNCTIONS IN: amino acid transmembrane transporter activity, L-proline transmembrane transporter activity; INVOLVED IN: proline transport, amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: proline transporter 3 (TAIR:AT2G36590.1); Has 1473 Blast hits to 1467 proteins in 157 species: Archae - 0; Bacteria - 4; Metazoa - 93; Fungi - 146; Plants - 1200; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015824 | IGI | Gene Ontology | proline transport | 1 |
| GO:0035524 | IEA | GOA Database | proline transmembrane transport | |
| GO:0006865 | IEA | GOA Database | amino acid transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015171 | ISS | Gene Ontology | amino acid transmembrane transporter activity | |
| GO:0015193 | IGI | Gene Ontology | L-proline transmembrane transporter activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA IBA | Gene Ontology | plasma membrane | 2 3 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013057 | Amino acid transporter, transmembrane domain |
| Mapman id | Description |
|---|---|
| 24.2.3.4.3 | Solute transport.carrier-mediated transport.APC superfamily.AAAP family.proline transporter (ProT) |