Gene: AT2G32700

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G32700
  • Transcript Identifier AT2G32700.6
  • Gene Type Coding gene
  • Location Chr2 : 13867235-13871844 : positive

Gene Family Information

  • ID HOM05D000836
  • #Genes/#Species 712/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G32700.6
  • symbol LUH
  • Alias MUM1,MUCILAGE-MODIFIED 1
  • full_name LEUNIG_homolog
  • uniprot O48847

Descriptions

  • Description LEUNIG-like protein
  • Computational description LEUNIG_homolog (LUH); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1); Has 67720 Blast hits to 31790 proteins in 821 species: Archae - 72; Bacteria - 8702; Metazoa - 26412; Fungi - 15362; Plants - 8347; Viruses - 0; Other Eukaryotes - 8825 (source: NCBI BLink).
  • Computational description LEUNIG_homolog (LUH); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: flower development, negative regulation of transcription, embryo development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LisH dimerisation motif;WD40/YVTN repeat-like-containing domain (TAIR:AT4G32551.1); Has 67484 Blast hits to 31766 proteins in 819 species: Archae - 68; Bacteria - 8700; Metazoa - 26198; Fungi - 15367; Plants - 8354; Viruses - 0; Other Eukaryotes - 8797 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0009944
IMP
Gene Ontologypolarity specification of adaxial/abaxial axis2
GO:0010073
IMP
Gene Ontologymeristem maintenance2
GO:1902183
IMP
Gene Ontologyregulation of shoot apical meristem development2
GO:2000024
IMP
Gene Ontologyregulation of leaf development2
GO:0080001
IMP
Gene Ontologymucilage extrusion from seed coat3
GO:0006355
IMP
Gene Ontologyregulation of transcription, DNA-templated4
GO:0010393
IMP
Gene Ontologygalacturonan metabolic process4
GO:0048358
IMP
Gene Ontologymucilage pectin biosynthetic process4
GO:0048359
IMP
Gene Ontologymucilage metabolic process involved in seed coat development4
GO:1902074
IEP
Gene Ontologyresponse to salt5
GO:0045892
IDA, IPI
Gene Ontologynegative regulation of transcription, DNA-templated5 6
GO:0047484
IMP
Gene Ontologyregulation of response to osmotic stress6
GO:1901001
IMP
Gene Ontologynegative regulation of response to salt stress6
GO:0010044
IMP
Gene Ontologyresponse to aluminum ion7
GO:1902066
IMP
Gene Ontologyregulation of cell wall pectin metabolic process7
GO:0009908
IEA
GOA Databaseflower development
GO:0009908
IGI
Gene Ontologyflower development5
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009620
IEP
Gene Ontologyresponse to fungus5
GO:0009827
IMP
Gene Ontologyplant-type cell wall modification8
GO:0010192
IMP
Gene Ontologymucilage biosynthetic process8
GO:0001666
IEP
Gene Ontologyresponse to hypoxia5
GO:0006974
IEP
Gene Ontologycellular response to DNA damage stimulus5
GO:0006979
IEP
Gene Ontologyresponse to oxidative stress5
GO:0009414
IEP
Gene Ontologyresponse to water deprivation5
GO:0009611
IEP
Gene Ontologyresponse to wounding5
GO:0009617
IEP
Gene Ontologyresponse to bacterium5
GO:0009624
IEP
Gene Ontologyresponse to nematode5
GO:0009733
IEP
Gene Ontologyresponse to auxin5
GO:0009793
IGI
Gene Ontologyembryo development ending in seed dormancy5
GO:0009909
IMP
Gene Ontologyregulation of flower development5
GO:0010272
IEP
Gene Ontologyresponse to silver ion5
GO:0045995
IMP
Gene Ontologyregulation of embryonic development5
GO:0046898
IEP
Gene Ontologyresponse to cycloheximide5
GO:0071217
IDA
Gene Ontologycellular response to external biotic stimulus5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003713
IDA
Gene Ontologytranscription coactivator activity1
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0005515
IEA
InterProprotein binding
GO:0003714
IEA
Gene Ontologytranscription corepressor activity
GO:0003714
IEA
InterProtranscription corepressor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006594 LIS1 homology motif
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR044716 Transcriptional corepressor LEUNIG-like
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
12.4.1.3.4 Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.plant-specific components.component LUH
15.5.51.6.1 RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.component LUG/LUH