Gene: AT2G25850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G25850
  • Transcript Identifier AT2G25850.6
  • Gene Type Coding gene
  • Location Chr2 : 11026587-11030440 : negative

Gene Family Information

  • ID HOM05D000949
  • #Genes/#Species 633/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G25850.6
  • symbol PAPS2
  • uniprot O82312

Descriptions

  • Description poly(A) polymerase 2
  • Computational description poly(A) polymerase 2 (PAPS2); CONTAINS InterPro DOMAIN/s: Poly(A) polymerase (InterPro:IPR014492), Nucleotidyltransferase, class I, C-terminal-like (InterPro:IPR011068), Poly(A) polymerase, central domain (InterPro:IPR007012), Nucleotidyl transferase domain (InterPro:IPR002934), Poly(A) polymerase, RNA-binding domain (InterPro:IPR007010); BEST Arabidopsis thaliana protein match is: nuclear poly(a) polymerase (TAIR:AT4G32850.6); Has 814 Blast hits to 806 proteins in 220 species: Archae - 0; Bacteria - 13; Metazoa - 260; Fungi - 214; Plants - 191; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031123
IEA
Gene OntologyRNA 3'-end processing
GO:0031123
IEA
InterProRNA 3'-end processing
GO:0043631
IDA
IEA
Gene OntologyRNA polyadenylation1
GO:0043631
IEA
InterProRNA polyadenylation
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006378
IBA
Gene OntologymRNA polyadenylation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004652
IBA
IEA
Gene Ontologypolynucleotide adenylyltransferase activity2
GO:0004652
IEA
InterPropolynucleotide adenylyltransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 2
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043519 Nucleotidyltransferase superfamily
IPR007010 Poly(A) polymerase, RNA-binding domain
IPR011068 Nucleotidyltransferase, class I-like, C-terminal
IPR002934 Polymerase, nucleotidyl transferase domain
IPR007012 Poly(A) polymerase, central domain
Mapman id Description
16.3.1.1.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase