Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 0.0e+00 1208.7 614 100.0
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 0.0e+00 1153.7 618 94.2
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 0.0e+00 1139.0 617 93.5
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 0.0e+00 1087.0 625 88.2
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 4.2e-310 1067.4 619 86.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 2.2e-303 1045.0 619 83.4
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.4e-302 1042.3 618 84.8
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 4.2e-302 1040.8 618 85.0
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 5.1e-300 1033.9 620 84.7
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 5.1e-300 1033.9 620 84.7
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 4.3e-299 1030.8 626 83.1
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 5.8e-296 1020.4 556 93.3
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 7.4e-259 897.1 624 71.0
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.1e-257 893.3 627 70.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.8e-257 892.5 630 71.0
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.9e-256 887.5 628 69.7
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 2.5e-254 882.1 628 70.1
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 3.2e-254 881.7 626 69.3
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 5.5e-254 880.9 626 68.8
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 5.5e-254 880.9 627 70.0
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.7e-253 878.6 619 68.8
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.4e-252 876.3 628 69.1
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 5.2e-252 874.4 628 68.9
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.1e-251 873.2 635 69.0
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.3e-251 871.7 628 68.8
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 9.7e-251 870.2 625 68.5
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 2.8e-250 868.6 625 68.5
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 4.8e-250 867.8 623 67.6
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 8.2e-250 867.1 623 67.9
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 5.3e-249 864.4 631 68.8
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.5e-248 861.7 628 67.8
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 4.5e-248 861.3 673 64.5
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 4.5e-248 861.3 622 66.4
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 7.2e-246 854.0 633 66.0
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.2e-245 853.2 626 67.1
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.2e-245 853.2 629 67.4
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 4.7e-245 851.3 621 67.1
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.3e-244 849.0 622 67.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 6.7e-244 847.4 631 67.2
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 6.7e-244 847.4 627 67.8
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.2e-243 846.7 629 67.2
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 2.6e-243 845.5 628 68.0
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 4.4e-243 844.7 631 66.1
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 4.4e-243 844.7 650 66.0
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 5.7e-243 844.3 623 66.1
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 2.8e-242 842.0 620 67.3
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.7e-242 841.6 631 66.7
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 4.8e-242 841.3 622 66.4
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 8.2e-242 840.5 622 65.9
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 8.2e-242 840.5 628 66.4
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.4e-241 839.0 611 68.9
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.2e-240 836.6 631 66.2
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.0e-240 835.9 607 68.7
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 2.7e-240 835.5 645 65.4
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 3.5e-240 835.1 622 66.4
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 5.9e-240 834.3 623 65.8
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 7.7e-240 833.9 633 65.4
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 7.7e-240 833.9 625 65.1
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.3e-239 833.2 623 65.3
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.9e-239 832.0 631 66.1
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.8e-239 831.6 623 64.7
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 8.5e-239 830.5 623 66.1
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.1e-238 830.1 623 64.4
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 7.2e-238 827.4 606 67.5
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 2.6e-235 818.9 628 65.3
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 4.4e-235 818.1 631 64.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.7e-234 816.2 601 66.6
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.7e-234 815.1 628 64.5
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.8e-233 812.8 576 69.4
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.1e-233 812.0 598 67.1
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 3.1e-233 812.0 614 63.8
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 1.0e-231 807.0 612 64.9
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.3e-231 806.6 626 62.9
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.7e-231 806.2 624 65.4
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 6.6e-231 804.3 632 63.4
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 8.0e-229 797.3 592 66.9
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 3.0e-228 795.4 662 61.3
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 4.0e-228 795.0 626 62.3
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 2.0e-227 792.7 629 65.0
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 2.2e-226 789.3 630 63.2
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 2.3e-223 779.2 622 63.0
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.5e-222 775.8 585 65.5
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.0e-220 770.4 571 66.5
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.9e-218 761.5 592 64.0
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 1.0e-215 753.8 629 62.8
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 3.0e-215 752.3 620 60.8
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.9e-214 749.6 627 59.8
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.2e-205 720.3 626 56.9
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 6.8e-196 688.0 596 58.1
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 9.6e-190 667.5 627 54.9
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.0e-183 647.5 450 71.6
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.6e-176 623.6 443 68.8
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 9.6e-174 614.4 623 52.2
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.3e-173 614.0 488 62.3
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 5.8e-171 605.1 446 66.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.8e-163 578.6 416 66.6
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 8.4e-162 574.7 639 47.7
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 2.1e-152 543.5 401 67.8
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 8.5e-146 521.5 597 46.1
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.3e-143 513.5 624 45.5
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.3e-141 505.4 399 62.2
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.2e-138 496.9 417 61.6
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.4e-111 407.9 417 55.6
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 2.4e-108 397.1 607 40.4
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 5.0e-106 389.4 764 33.8
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.9e-93 347.1 269 65.8
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 3.1e-71 273.9 176 78.4
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 9.7e-41 172.6 170 51.2
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 2.9e-37 161.0 211 42.2
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.6e-35 153.7 146 52.1
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.3e-33 147.5 163 49.1
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 3.6e-27 127.5 77 76.6
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.4e-23 115.5 76 76.3
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 5.3e-15 87.0 84 56.0
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.9e-12 78.6 116 41.4
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.2e-08 65.1 45 68.9
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.7e-08 64.3 36 77.8


User provided reference genes

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