Gene: AT1G80260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G80260
  • Transcript Identifier AT1G80260.3
  • Gene Type Coding gene
  • Location Chr1 : 30175924-30179722 : positive

Gene Family Information

  • ID HOM05D004952
  • #Genes/#Species 150/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G80260.3
  • symbol emb1427
  • full_name embryo defective 1427
  • uniprot Q0WPZ0

Descriptions

  • Description Spc97 / Spc98 family of spindle pole body (SBP) component
  • Computational description embryo defective 1427 (emb1427); FUNCTIONS IN: tubulin binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: spindle pole, microtubule organizing center; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G20570.1); Has 1146 Blast hits to 1005 proteins in 166 species: Archae - 0; Bacteria - 0; Metazoa - 591; Fungi - 250; Plants - 182; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007020
IBA
IEA
Gene Ontologymicrotubule nucleation1
GO:0007020
IEA
InterPromicrotubule nucleation
GO:0000226
IEA
GOA Databasemicrotubule cytoskeleton organization
GO:0000226
IEA
InterPromicrotubule cytoskeleton organization
GO:0000278
IBA
Gene Ontologymitotic cell cycle1
GO:0051225
IBA
Gene Ontologyspindle assembly1
GO:0031122
IBA
Gene Ontologycytoplasmic microtubule organization1
GO:0051321
IBA
Gene Ontologymeiotic cell cycle1
GO:0009793
NAS
Gene Ontologyembryo development ending in seed dormancy

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043015
IBA
IEA
Gene Ontologygamma-tubulin binding1
GO:0043015
IEA
InterProgamma-tubulin binding
GO:0051011
IBA
Gene Ontologymicrotubule minus-end binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000923
IBA
Gene Ontologyequatorial microtubule organizing center1
GO:0005815
IEA
Gene Ontologymicrotubule organizing center
GO:0005815
IEA
InterPromicrotubule organizing center
GO:0000922
IEA
Gene Ontologyspindle pole
GO:0000922
IEA
InterProspindle pole
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005874
IEA
GOA Databasemicrotubule
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005813
IBA
Gene Ontologycentrosome1
GO:0000930
IBA
Gene Ontologygamma-tubulin complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041470 Gamma tubulin complex component protein, N-terminal
IPR007259 Gamma-tubulin complex component protein
IPR040457 Gamma tubulin complex component, C-terminal
IPR042241 Gamma-tubulin complex, C-terminal domain superfamily
Mapman id Description
20.1.2.1.5 Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).component GCP5